Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04041 and BL01151
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:05
# Commandline: needle
# -asequence pep-align/BSNT_04041.1.5803.seq
# -bsequence pep-align/BL01151___coxA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04041-BL01151___coxA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04041-BL01151___coxA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04041
# 2: BL01151___coxA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 223
# Identity: 89/223 (39.9%)
# Similarity: 132/223 (59.2%)
# Gaps: 37/223 (16.6%)
# Score: 397.5
#
#
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BSNT_04041 1 MGKKMTIAS-LILMTAGLTACGANDNAMNDTRNNDNTRPIGYYSNENDAD 49
|..|:.:.| ::|:||||:|||.|| |:: |.:||||||||| ||||
BL01151___cox 1 MDSKLKVFSGILLLTAGLSACGTND-AID---NGNNTRPIGYYS--NDAD 44
BSNT_04041 50 RQGDGIDHDGPVSELMEDQNDGNRNTTNVNNRDRVTADDRVPLAT-DGTY 98
|.. |:|:||||:|::|:.| |....|||||| |.:..|:.| ||||
BL01151___cox 45 RNA-GLDNDGPVTEMLENMN-GRNGATNVNNR----AGNGNPVPTGDGTY 88
BSNT_04041 99 N--NTNNRNMNRNAANNGYDNQENRRLAAKIANRVKQVKNVNDTQVMVSD 146
: :.|..|...|.|:.|||..|||:::..|..||.::..|:::|.:|::
BL01151___cox 89 SRGDMNYHNHLVNTADTGYDRPENRKISRNITGRVNKLNYVDESQAVVTN 138
BSNT_04041 147 DRVVIAVKSHREFTKSDRDNVVKAARNYANGRDVQVSTDKGLFRKLHKMN 196
:.|:|||:|.:..|.::|..:.|||:.:|..|.|||..|.|.|.:|.:||
BL01151___cox 139 ETVIIAVRSDKRLTNNERTQIRKAAKTFAGDRTVQVVEDDGAFTRLREMN 188
BSNT_04041 197 NR--------------------- 198
:.
BL01151___cox 189 DDPQNIRDRGDTTNNNLNRLRNQ 211
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