Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04018 and BL01139

See DNA alignment / Visit BSNT_04018 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:04
# Commandline: needle
#    -asequence pep-align/BSNT_04018___yajC.1.5803.seq
#    -bsequence pep-align/BL01139___yajC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04018___yajC-BL01139___yajC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04018___yajC-BL01139___yajC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04018___yajC
# 2: BL01139___yajC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 89
# Identity:      78/89 (87.6%)
# Similarity:    79/89 (88.8%)
# Gaps:           3/89 ( 3.4%)
# Score: 379.0
# 
#
#=======================================

BSNT_04018___      1 MMTGTLGTLVPIILMFAVLYFLLIRPQQKQQKAVRQMQEELKKGDSVVTI     50
                       ...||||:|||||||||||||||||||||||||||||||||||.||||
BL01139___yaj      1 --MEMLGTLLPIILMFAVLYFLLIRPQQKQQKAVRQMQEELKKGDKVVTI     48

BSNT_04018___     51 GGLHGTVDSIDESKVVIKTGDNTRLTFDRRAIREVSAAE     89
                     |||||.||||||||||||||||||||||||||||.||. 
BL01139___yaj     49 GGLHGIVDSIDESKVVIKTGDNTRLTFDRRAIREASAE-     86


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