Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04050 and BL01136
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:06
# Commandline: needle
# -asequence pep-align/BSNT_04050___nifS.1.5803.seq
# -bsequence pep-align/BL01136___nifS.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04050___nifS-BL01136___nifS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04050___nifS-BL01136___nifS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04050___nifS
# 2: BL01136___nifS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 401
# Identity: 242/401 (60.3%)
# Similarity: 300/401 (74.8%)
# Gaps: 10/401 ( 2.5%)
# Score: 1266.0
#
#
#=======================================
BSNT_04050___ 1 MEEDRMIYLDYAATTPICEEALTVYQKLSMDMYGNASSLHDAGGKAKHIL 50
|||||||||||..:|||..:||||.|:|||:||||||||||::||
BL01136___nif 1 -----MIYLDYAATTPASKEALDAFQKLSTDVYGNSSSLHDAGGKAENIL 45
BSNT_04050___ 51 EYCREKIANIIGGEASGIYFTSGGTESNFLAIQSLLNGLPKTKRHFIMTA 100
..||:::|.::.||..|:||||||||:|||||.|:|||||..|:.|:||.
BL01136___nif 46 RCCRQRMAELLSGEEEGVYFTSGGTEANFLAIHSILNGLPAGKKRFLMTE 95
BSNT_04050___ 101 MEHQSIHNCAAFLEQQGYDVTVIEPNEYGLITEEILLAHIRPETGLVSIQ 150
|||||||.....||..|:||.:::||..|:||.:||..|:||:|||||||
BL01136___nif 96 MEHQSIHILKRHLEMLGFDVDLMKPNASGIITTDILERHLRPDTGLVSIQ 145
BSNT_04050___ 151 HANSETGIIQPIQRLSSYLHNKGILLHCDAVQTFGKIPINTKNLGVDALS 200
|||||||:|||:.:||:|||.:.:|||.|.||||.|||:....||.||||
BL01136___nif 146 HANSETGVIQPLAKLSAYLHKRDVLLHSDCVQTFAKIPVRIDELGADALS 195
BSNT_04050___ 201 MSSHKIHGPKGVGAVYIRPDVPWKPVYHLTTHEYGFRAGTVNVPGIGAFT 250
:||||::||||||||||||.|.|||||..|.||.||::|||||||||||.
BL01136___nif 196 VSSHKVYGPKGVGAVYIRPGVNWKPVYPGTLHENGFKSGTVNVPGIGAFI 245
BSNT_04050___ 251 AAAELIVSEMEKQISRNEALRTYFLDQIRIRSLPVTLAA-DTSKAECLPH 299
.||:..::.|:....:.:.||..||:.::.|.|||:||. |::.:..|||
BL01136___nif 246 TAADSTINRMDAAHLKFQELRAGFLEGVKDRKLPVSLAVPDSANSHVLPH 295
BSNT_04050___ 300 IIGCFFHSFEGQYVMLECNRSNICISTGSACSAGYHGPSETMKALRKTEQ 349
|||||||||||||.||||||..||||||||||||||.||.|||||....:
BL01136___nif 296 IIGCFFHSFEGQYTMLECNRRGICISTGSACSAGYHEPSNTMKALLIPRE 345
BSNT_04050___ 350 EALQFIRISFGRHTTAEQLEQLLHTFTVLWEQKKGEFDIDRRIKANGRQQ 399
.||||:|||||..||:|.:::||.....:..: ||:..||||||..|.
BL01136___nif 346 LALQFVRISFGCDTTSEHVDRLLDVLEDMMNE-KGDHRIDRRIKTYGS-- 392
BSNT_04050___ 400 A 400
BL01136___nif 392 - 392
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