Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04007 and BL01127

See DNA alignment / Visit BSNT_04007 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:03
# Commandline: needle
#    -asequence pep-align/BSNT_04007___yrvE.1.5803.seq
#    -bsequence pep-align/BL01127___recJ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04007___yrvE-BL01127___recJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04007___yrvE-BL01127___recJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04007___yrvE
# 2: BL01127___recJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 786
# Identity:     535/786 (68.1%)
# Similarity:   655/786 (83.3%)
# Gaps:           4/786 ( 0.5%)
# Score: 2846.0
# 
#
#=======================================

BSNT_04007___      1 MLASKMRWEIQRPDQDKVKSLTEQLHITPLVASLLVKRGFDTAESARLFL     50
                     ||||||||::|.||::||:.|..:|.||||.|||||.||:|||:.|..||
BL01127___rec      1 MLASKMRWDVQTPDKEKVEQLAGRLGITPLAASLLVMRGYDTADKASSFL     50

BSNT_04007___     51 HTKDADFYDPFEMKGMKEAADRIKQAISQQEKIMIYGDYDADGVTSTSVM    100
                     :..||.|:||:.:|.|::|..|||||||.||||||||||||||||||:|:
BL01127___rec     51 YGNDARFHDPYLLKDMEKAVRRIKQAISDQEKIMIYGDYDADGVTSTTVL    100

BSNT_04007___    101 LHTLQKLSAQVDFYIPDRFKEGYGPNEQAFRSIKDRGFSLIITVDTGIAA    150
                     |..|:|.|||.||||||||||||||||.|||.||:.|:|||||||||||.
BL01127___rec    101 LQMLKKCSAQADFYIPDRFKEGYGPNEAAFRGIKESGYSLIITVDTGIAG    150

BSNT_04007___    151 VHEAKVAKELGLDVIITDHHEPGPELPDVHAIVHPKQPGCTYPFKELAGV    200
                     ||||:||||||:|:||||||||||.|||.:||:|||||||.|||||||||
BL01127___rec    151 VHEAEVAKELGIDLIITDHHEPGPVLPDAYAIIHPKQPGCGYPFKELAGV    200

BSNT_04007___    201 GVAFKLAHALLGELPDELLDLAAIGTIADLVPLHDENRLIATLGLERLRR    250
                     ||||||||||.||||::||||.||||||||||||||||.||..|:|:.|:
BL01127___rec    201 GVAFKLAHALNGELPEDLLDLCAIGTIADLVPLHDENRQIAKRGMEQFRK    250

BSNT_04007___    251 TNRLGLKELIKLSGGDIGEANEETVGFQLAPRLNAVGRIEQADPAVHLLM    300
                     |.|.|||.|.|::|.:|..|:|||:|||:|||||||||||||||||:||.
BL01127___rec    251 TKRPGLKALAKIAGAEIHNADEETIGFQIAPRLNAVGRIEQADPAVYLLN    300

BSNT_04007___    301 SEDSFEAEELAAEIDQLNKERQKMVSKMTDEAIEMVEQQGLDQTAIVVAK    350
                     :||..||||||.:|:.|||||||:|::||:||::|:|::||||..||||:
BL01127___rec    301 TEDEREAEELAEDINALNKERQKIVNQMTEEAVQMIEEEGLDQPVIVVAR    350

BSNT_04007___    351 AGWNPGVVGIVASKLVDRFYRPAIVLGIDEEKGIAKGSARSIRGFNLFES    400
                     .|||||||||||||||:||||||||||:||||||||||||||:||:||::
BL01127___rec    351 PGWNPGVVGIVASKLVERFYRPAIVLGVDEEKGIAKGSARSIKGFDLFQN    400

BSNT_04007___    401 LSECRDILPHFGGHPMAAGMTLKAEDVPDLRSRLNEIADNTLTEEDFIPV    450
                     ||||||||||||||||||||||..|||..||.|:|..|:..|||.|||||
BL01127___rec    401 LSECRDILPHFGGHPMAAGMTLNLEDVSALRERINRQAEAVLTEADFIPV    450

BSNT_04007___    451 QEVDLVCSIEDITVESIAEMNMLSPFGMLNPKPHVLVENAVLEDVRKIGA    500
                     |:|||.|.:|||:|:||||||:|:|||..||||.|||.:..::|.|||||
BL01127___rec    451 QDVDLCCRLEDISVDSIAEMNLLAPFGTGNPKPFVLVSDVKIDDARKIGA    500

BSNT_04007___    501 NKTHVKMTIRNESSQLDCVGFNKGELQEGIVPGSRISIVGEMSINEWNNR    550
                     ||.|:|:.:.::.::|||:||.||:::||||||::||||||:||||||||
BL01127___rec    501 NKNHLKLVLADDGNKLDCIGFYKGDIEEGIVPGAKISIVGELSINEWNNR    550

BSNT_04007___    551 KKPQLMIKDAAVSEWQLFDLRGKRTWEDTVSALPSAKRAIVSFKEDSTTL    600
                     ||||||||||||:|||||||||||:||:.:..|..||||.:.|:|::...
BL01127___rec    551 KKPQLMIKDAAVNEWQLFDLRGKRSWEEKILKLDPAKRACICFREETKAK    600

BSNT_04007___    601 LQTEDLRREVHVISSKDQAKAFDLDGAYIVLLDPPPSLDMLARLLEGKAP    650
                     |....|..|:.|||..:.|:..||:..|.|.:|.|.|||:...::.||..
BL01127___rec    601 LAGTGLEEELTVISGPEDAERLDLESRYAVFIDIPQSLDIFDHVINGKKL    650

BSNT_04007___    651 ERIYFIFLNHEDHFLSTFPARDHFKWYYAFLLKRGAFDVKKHGSELAKHK    700
                     ||||.||...::||.||||.|::||||||||||||:||:.|:|.|||:||
BL01127___rec    651 ERIYLIFYQSDEHFFSTFPTREYFKWYYAFLLKRGSFDLPKYGGELARHK    700

BSNT_04007___    701 GWSVETINFMTKVFFDLGFVKIENGVLSVVSGAKKRDLTDSQTYQAKQQL    750
                     ||:.:||:|||||||:||||.|||||||||..|:|||||||:||:.||:|
BL01127___rec    701 GWTKDTIDFMTKVFFELGFVTIENGVLSVVYHAEKRDLTDSETYREKQRL    750

BSNT_04007___    751 MELDQKLNYSSAEELKEWLNKLMKQDSEAYESTRRT    786
                     :||:|||.||||:|||:||:|.|.:.:.||:.    
BL01127___rec    751 IELEQKLIYSSADELKQWLDKRMAEKAGAYKV----    782


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_04007 and BL01127

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
