Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04002 and BL01120
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:02
# Commandline: needle
# -asequence pep-align/BSNT_04002___yrvJ.1.5803.seq
# -bsequence pep-align/BL01120___yrvJ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04002___yrvJ-BL01120___yrvJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04002___yrvJ-BL01120___yrvJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04002___yrvJ
# 2: BL01120___yrvJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 569
# Identity: 305/569 (53.6%)
# Similarity: 388/569 (68.2%)
# Gaps: 54/569 ( 9.5%)
# Score: 1585.0
#
#
#=======================================
BSNT_04002___ 1 MHTFLIVFTLSINKSFYFYLKIRKDFTILNKNAFLMIIRKEDTMNKKYFV 50
.||..|
BL01120___yrv 1 --------------------------------------------MKKRAV 6
BSNT_04002___ 51 LIVCIIFT--AALFPTFSSVTAAQGEAVIATDETNVRSGPGLSYGITAEV 98
||:.::.. ||.:.:.::.:||.|||||||||.|||||||||:.|.:.|
BL01120___yrv 7 LILSMMLAAQAAFYTSSNTASAAIGEAVIATDEINVRSGPGLSHEIVSVV 56
BSNT_04002___ 99 KKGERYPILKEDGDWVQIQLGSGEKGWVVSWLITKEDQASTSSSGSSDTV 148
.:.|.||||:|.||||||||..|:|||||||||.|:.|.|:.|..:|..|
BL01120___yrv 57 SRNESYPILEERGDWVQIQLNGGQKGWVVSWLIKKKSQVSSGSDSASGKV 106
BSNT_04002___ 149 TSTDPDLRMRSGPGTSYEVIGKFPQGSQASVIDKDSGWIKISYHSATGWV 198
||::.:||:|.||||||||.|.||:|.||.::..|..||||||.:.||||
BL01120___yrv 107 TSSEANLRIRKGPGTSYEVQGVFPEGEQADLLKTDGKWIKISYQNITGWV 156
BSNT_04002___ 199 SSEYVTSGGSSSASDESDQTEDSGASTTGTVGVSSLNVRASASHDAAIIT 248
.|:||..| |.|......:..:.:|.:||||||:||||::|||...||.
BL01120___yrv 157 YSDYVNQG--SGAKQSQSSSSHASSSKSGTVGVSTLNVRSTASHQGRIIA 204
BSNT_04002___ 249 KLDRGTKLTVLNEKNGWAHIEVNGLKGWVASHYLLTSSVPADDSANAGSS 298
.|.|...:|:|||::||..||.||.|||.||||:|..:.....::...||
BL01120___yrv 205 TLQRNASVTILNEQHGWYEIEFNGQKGWAASHYILEGNKQNSGTSETSSS 254
BSNT_04002___ 299 SSAKK-AYIMYGGTNLRSDASTSASIVERAAKGDSYTITGSKGSWYEIKL 347
|.||: |.|:|.|||:||..|||::||:|..||:||.|..:||.||||||
BL01120___yrv 255 SEAKRQATIVYEGTNVRSGPSTSSAIVKRTGKGESYPIVSTKGDWYEIKL 304
BSNT_04002___ 348 DNGQTAYVANWVVQTSKSAEEAGE-----PPVSDSPSGNGSLNNKTIIVD 392
.||.:||||:|||||...|..||: ||::...|..|::.|||:::|
BL01120___yrv 305 SNGDSAYVASWVVQTVDQAGSAGDSKSAAPPLAKRSSSGGTIKNKTVVID 354
BSNT_04002___ 393 PGHGGKDSGTIGYSGKFEKNLTIKTAKLLASKLRSAGADVYVTRQDDTFV 442
.||||.||||||..|..||.||||||.|||:|||:.|.:||:||.||:||
BL01120___yrv 355 AGHGGHDSGTIGTRGTLEKRLTIKTATLLAAKLRADGVNVYMTRNDDSFV 404
BSNT_04002___ 443 SLQSRVSTSHYRNADAFISIHYDSYADTSTRGSTAYYYSPAKDQELASDV 492
||||||:|||||||||||||||||:.:.|.||:|||||||:||::||:||
BL01120___yrv 405 SLQSRVATSHYRNADAFISIHYDSFPNASVRGNTAYYYSPSKDRKLAADV 454
BSNT_04002___ 493 HSEVVKRSSIPDRGVLFGDYYVLRENRQPAMLYELGYVSHPQEEAIVHSN 542
.||:.:.|.:|.||||||||:|||||:|||.|:||||:|||||||:|.:|
BL01120___yrv 455 QSEIERHSPLPSRGVLFGDYFVLRENKQPAALFELGYLSHPQEEAVVSTN 504
BSNT_04002___ 543 SYQEKVTDGIESGLEKYFQ 561
:|:|:|||||.||||.||.
BL01120___yrv 505 AYRERVTDGIRSGLENYFD 523
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