Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05872 and BL01118
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:56
# Commandline: needle
# -asequence pep-align/BSNT_05872___epr.1.5803.seq
# -bsequence pep-align/BL01118___epr.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05872___epr-BL01118___epr.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05872___epr-BL01118___epr.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05872___epr
# 2: BL01118___epr
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 687
# Identity: 361/687 (52.5%)
# Similarity: 449/687 (65.4%)
# Gaps: 98/687 (14.3%)
# Score: 1737.0
#
#
#=======================================
BSNT_05872___ 1 MKNMSCKLVVSVTLFFSFLTIGPLAHAQ-NSSEKEVIVVYKNKAGKETIL 49
||.: .|:.||..:|..|....|...|: |..|.||||||||.:||||::
BL01118___epr 1 MKKL-WKIAVSAAMFVGFFANSPRIQAESNKQENEVIVVYKNTSGKETVI 49
BSNT_05872___ 50 DSDADVEQQYKHLPAVAVTADQETVKELKQDPDILYVENNVSFTAADSTD 99
:....||..|:|:||.|||||.:||:||:.|||:||||:|:...|||||.
BL01118___epr 50 EQADTVEHVYRHIPAAAVTADDKTVRELEHDPDVLYVEDNLPVAAADSTA 99
BSNT_05872___ 100 FKVLSDGT-DTSDNFEQWNLEPIQVKQAWKAGLTGKNIKIAVIDSGISPH 148
.|..|..| ..:..|.|||::.||...||..|||||.:||||||||||||
BL01118___epr 100 LKAFSSSTAQNASAFSQWNIKLIQAALAWNKGLTGKQVKIAVIDSGISPH 149
BSNT_05872___ 149 DDLSIAGGYSAVSYTSSYKDDNGHGTHVAGIIGAKHNGYGIDGIAPEAQI 198
::||||||.|.|.||:||:|||||||||||||||||||.|||||||.||:
BL01118___epr 150 EELSIAGGASMVGYTASYRDDNGHGTHVAGIIGAKHNGRGIDGIAPGAQL 199
BSNT_05872___ 199 YAVKALDQNGSGDLQSLLQGIDWSIANGMDIVNMSLGTTSDSKILHDAVN 248
|||||||:||:|||:.:||||||||.:|:||:||||..:.||::|||||:
BL01118___epr 200 YAVKALDRNGAGDLKGILQGIDWSIQHGIDIINMSLVVSGDSQVLHDAVD 249
BSNT_05872___ 249 KAYEQGVLLVAASGNDGNGKPVNYPAAYSSVVAVSATNEKNQLASFSTTG 298
|||::|::||.||||.||||.|.||||||||:||||||||||:||||.||
BL01118___epr 250 KAYKRGIILVGASGNAGNGKSVYYPAAYSSVIAVSATNEKNQIASFSNTG 299
BSNT_05872___ 299 DEVEFSAPGTNITSTYLNQYYATGSGTSQATPHAAAMFALLKQRDPAETN 348
..||||||||:|.||..::.||.||||||||||...|||||||..|..:|
BL01118___epr 300 SAVEFSAPGTSIISTSSDRGYAIGSGTSQATPHVTGMFALLKQLYPTASN 349
BSNT_05872___ 349 VQLREEMRRNIVDLGTAGRDQQFGYGLIQYKAQATDSAYAAAEQAVKKAE 398
.:||::|:....|||..|||..||||||::| |
BL01118___epr 350 AELRKKMQFYTSDLGAPGRDHLFGYGLIRFK------------------E 381
BSNT_05872___ 399 QTKAQTDINKAQELVSQLPGSDAKTALQKRLDKVQSYRNVKDAKDKVANA 448
.|: .:.|||:.|.| |
BL01118___epr 382 VTQ---PLEKAQKAVGQ--------------------------------A 396
BSNT_05872___ 449 EKYKTQQTVDTAQTAINKLPNGTDKKNLQKRLDQVKRYIASKQAKDKVAK 498
||.|.:..:.|||.||..||...||..|:|||:.||..: .|.|:.||..
BL01118___epr 397 EKTKKKADIQTAQKAIEPLPADADKTALKKRLNTVKEQL-KKTAESKVKL 445
BSNT_05872___ 499 AEKSKKKTDVDSAQSAIGKLPASSEKTSLQKRLNKVKSTNLKTAQQSVSA 548
|||.||||:.||||.|:.:|.:.:.||:||||:|.|:|:.||||:|:|:.
BL01118___epr 446 AEKQKKKTNADSAQKAVNELDSGTFKTNLQKRINAVRSSLLKTAKQAVAK 495
BSNT_05872___ 549 AEKKSTDANAAKAQSAVNQLQAGKDKTALQKRLDKVKKKVAAAEAKKVET 598
|||.:||:|..|||.|:|:|.|||||:.|||||:..||:.|||..|||..
BL01118___epr 496 AEKAATDSNLGKAQKAINELPAGKDKSNLQKRLNTAKKQAAAAYNKKVSA 545
BSNT_05872___ 599 AKAKVKKAEKDKTKKSKASAQSAVNQLKASNEKTKLQKRLNAVKPKSNQK 648
||||||.||:.:|||:|::|||||.:||||.||||||||:||:|.|
BL01118___epr 546 AKAKVKTAEQKRTKKTKSAAQSAVGKLKASAEKTKLQKRINAIKLK---- 591
BSNT_05872___ 649 PLRLAFQVLKVFYILRTSHTTFFPSIVQAFHTIAIQP 685
BL01118___epr 591 ------------------------------------- 591
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