Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01776 and BL01117

See DNA alignment / Visit BSNT_01776 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:16
# Commandline: needle
#    -asequence pep-align/BSNT_01776___yhjD.1.5803.seq
#    -bsequence pep-align/BL01117___yhjD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01776___yhjD-BL01117___yhjD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01776___yhjD-BL01117___yhjD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01776___yhjD
# 2: BL01117___yhjD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 125
# Identity:      66/125 (52.8%)
# Similarity:    90/125 (72.0%)
# Gaps:           6/125 ( 4.8%)
# Score: 358.5
# 
#
#=======================================

BSNT_01776___      1 MPNLQEEIYDLIERALFLPMAITIFNRDLAGIEESTLKLKHPYKQLISES     50
                     |..:..|..|:||:|::|||.::|.|||:..|::...|||.||..||.::
BL01117___yhj      1 MTRIPAEARDMIEKAIYLPMTVSILNRDMKIIQQGPFKLKDPYLHLIEQA     50

BSNT_01776___     51 LKIAQKDLMEVRKELRKRKIAIRETERDEAFTLYTFVIDGYEENHRYFNP    100
                     ||:||:||.:|:.|||:|||.:.|..||||||:|:|:.:||||.|.||||
BL01117___yhj     51 LKLAQRDLYDVKNELRRRKIKVHEVSRDEAFTMYSFIYEGYEEEHNYFNP    100

BSNT_01776___    101 RIREQVSELLTYYLF--APDRLRAF    123
                     |||.|||.||.:|||  |||:    
BL01117___yhj    101 RIRNQVSALLEHYLFKAAPDQ----    121


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