Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01744 and BL01110

See DNA alignment / Visit BSNT_01744 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:14
# Commandline: needle
#    -asequence pep-align/BSNT_01744___yhfM.1.5803.seq
#    -bsequence pep-align/BL01110___yhfM.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01744___yhfM-BL01110___yhfM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01744___yhfM-BL01110___yhfM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01744___yhfM
# 2: BL01110___yhfM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 155
# Identity:      34/155 (21.9%)
# Similarity:    70/155 (45.2%)
# Gaps:          31/155 (20.0%)
# Score: 135.5
# 
#
#=======================================

BSNT_01744___      1 MKKIVAAIVVIGLVFIAFFYLYSRSGDVYQSVDADLITLSSSG--QEDIE     48
                         :...:..|::.|..||::....:.:.|.:|:.|.|..:|  ::.:.
BL01110___yhf      1 ----MGIALFFGILSITVFYVFHLMAEPFDSRNAEEIILKQAGDSEKTVS     46

BSNT_01744___     49 IEKRQHVKDMLDIMNQGKQVKTEKTS----APDYEGTIKFHKDRYDSFRL     94
                     |:.|.::..:||..|:||::| :||:    :|.|.|.|.........|.:
BL01110___yhf     47 IKDRHNIAVLLDTFNKGKRMK-KKTAHHLPSPAYHGYISMTGTHRVHFTV     95

BSNT_01744___     95 WIDGSQQAVF-SKDGTYYKLSKNDTKALLNIIKKEAKD------------    131
                     |:...:..:. .::|||:.|.:.:..|||..::|  :|            
BL01110___yhf     96 WLKKDEAVILKEEEGTYFVLQQREKDALLGELQK--RDAAGVPFSGSRFV    143

BSNT_01744___    131 -----    131
                          
BL01110___yhf    144 CQNVF    148


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