Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01718 and BL01104
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:12
# Commandline: needle
# -asequence pep-align/BSNT_01718___yhaA.1.5803.seq
# -bsequence pep-align/BL01104___yhaA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01718___yhaA-BL01104___yhaA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01718___yhaA-BL01104___yhaA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01718___yhaA
# 2: BL01104___yhaA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 410
# Identity: 282/410 (68.8%)
# Similarity: 328/410 (80.0%)
# Gaps: 14/410 ( 3.4%)
# Score: 1519.0
#
#
#=======================================
BSNT_01718___ 1 MSISTLQKEINKQLDSCFEEMVEIRRHIHMYPELSFQEEKTAAFIASYYE 50
||.|...::||.|||:.::|||::|||.|.:|||||||:|||||||||||
BL01104___yha 1 MSASGFVRQINNQLDAHYDEMVKLRRHFHQHPELSFQEKKTAAFIASYYE 50
BSNT_01718___ 51 SLGVPIRTNVGGRGVLAYIEGSEPGPTVALRADFDALPIQDEKDVPYASK 100
:||:||||||||.||||||||..|||.:|||||||||||.||||.||.|.
BL01104___yha 51 ALGIPIRTNVGGGGVLAYIEGGSPGPVIALRADFDALPIHDEKDAPYRST 100
BSNT_01718___ 101 VPGVMHACGHDGHTAALLAVAKVLHQNRHELKGTFVMIHQHAEEYYPGGA 150
|||||||||||||||.||.:||||:::...|||..|.||||||||.||||
BL01104___yha 101 VPGVMHACGHDGHTATLLVLAKVLNEHADRLKGKIVFIHQHAEEYSPGGA 150
BSNT_01718___ 151 KPMIDDGCLENADVIFGTHLWATEPLGTILCRPGAVMAAADRFTIKVFGK 200
:|||:||||:..|||||||||||||.||:..|.|.:|||||||||.:.||
BL01104___yha 151 RPMIEDGCLDGVDVIFGTHLWATEPTGTVQYRTGPIMAAADRFTITIKGK 200
BSNT_01718___ 201 GGHGAHPHDTKDAVLIGSQIVTSLQHIVSRKVNPIQSAVISTGSFIADNP 250
|||||.||.||||||||||||||||.||||:::|.|.||||||||:|||.
BL01104___yha 201 GGHGAQPHKTKDAVLIGSQIVTSLQQIVSRRLDPTQPAVISTGSFVADNS 250
BSNT_01718___ 251 FNVIADQAVLIGTARSFDENVRDILEKEIEAVVKGICSMHGASYEYTYEQ 300
||||||:||||||||||:|.:|.::|.|||.|.||||.||||..:|::|:
BL01104___yha 251 FNVIADKAVLIGTARSFNEEIRTLIENEIEQVAKGICGMHGADCDYSFER 300
BSNT_01718___ 301 GYPAVVNHPAETSHLVSTAKNTEGVQQVIDGEPQMGGEDFSYYLQNVKGT 350
|||.|.|||.|||.|...||.||||::|.:...|||||||:||||:||||
BL01104___yha 301 GYPPVCNHPEETSFLAKIAKQTEGVEKVEESGMQMGGEDFAYYLQHVKGT 350
BSNT_01718___ 351 FFFTGAAPEQPDRVYSHHHPKFDINEKAMLTAAKVLAGAAITYHQL---- 396
||||||.||.|:.|:.||||||||:|||||.||||||.||::|.:.
BL01104___yha 351 FFFTGARPEDPEAVFPHHHPKFDIDEKAMLIAAKVLANAAVSYQEKEQAV 400
BSNT_01718___ 396 ---------- 396
BL01104___yha 401 RETPAMEQPK 410
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