Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01718 and BL01104

See DNA alignment / Visit BSNT_01718 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:12
# Commandline: needle
#    -asequence pep-align/BSNT_01718___yhaA.1.5803.seq
#    -bsequence pep-align/BL01104___yhaA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01718___yhaA-BL01104___yhaA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01718___yhaA-BL01104___yhaA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01718___yhaA
# 2: BL01104___yhaA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 410
# Identity:     282/410 (68.8%)
# Similarity:   328/410 (80.0%)
# Gaps:          14/410 ( 3.4%)
# Score: 1519.0
# 
#
#=======================================

BSNT_01718___      1 MSISTLQKEINKQLDSCFEEMVEIRRHIHMYPELSFQEEKTAAFIASYYE     50
                     ||.|...::||.|||:.::|||::|||.|.:|||||||:|||||||||||
BL01104___yha      1 MSASGFVRQINNQLDAHYDEMVKLRRHFHQHPELSFQEKKTAAFIASYYE     50

BSNT_01718___     51 SLGVPIRTNVGGRGVLAYIEGSEPGPTVALRADFDALPIQDEKDVPYASK    100
                     :||:||||||||.||||||||..|||.:|||||||||||.||||.||.|.
BL01104___yha     51 ALGIPIRTNVGGGGVLAYIEGGSPGPVIALRADFDALPIHDEKDAPYRST    100

BSNT_01718___    101 VPGVMHACGHDGHTAALLAVAKVLHQNRHELKGTFVMIHQHAEEYYPGGA    150
                     |||||||||||||||.||.:||||:::...|||..|.||||||||.||||
BL01104___yha    101 VPGVMHACGHDGHTATLLVLAKVLNEHADRLKGKIVFIHQHAEEYSPGGA    150

BSNT_01718___    151 KPMIDDGCLENADVIFGTHLWATEPLGTILCRPGAVMAAADRFTIKVFGK    200
                     :|||:||||:..|||||||||||||.||:..|.|.:|||||||||.:.||
BL01104___yha    151 RPMIEDGCLDGVDVIFGTHLWATEPTGTVQYRTGPIMAAADRFTITIKGK    200

BSNT_01718___    201 GGHGAHPHDTKDAVLIGSQIVTSLQHIVSRKVNPIQSAVISTGSFIADNP    250
                     |||||.||.||||||||||||||||.||||:::|.|.||||||||:|||.
BL01104___yha    201 GGHGAQPHKTKDAVLIGSQIVTSLQQIVSRRLDPTQPAVISTGSFVADNS    250

BSNT_01718___    251 FNVIADQAVLIGTARSFDENVRDILEKEIEAVVKGICSMHGASYEYTYEQ    300
                     ||||||:||||||||||:|.:|.::|.|||.|.||||.||||..:|::|:
BL01104___yha    251 FNVIADKAVLIGTARSFNEEIRTLIENEIEQVAKGICGMHGADCDYSFER    300

BSNT_01718___    301 GYPAVVNHPAETSHLVSTAKNTEGVQQVIDGEPQMGGEDFSYYLQNVKGT    350
                     |||.|.|||.|||.|...||.||||::|.:...|||||||:||||:||||
BL01104___yha    301 GYPPVCNHPEETSFLAKIAKQTEGVEKVEESGMQMGGEDFAYYLQHVKGT    350

BSNT_01718___    351 FFFTGAAPEQPDRVYSHHHPKFDINEKAMLTAAKVLAGAAITYHQL----    396
                     ||||||.||.|:.|:.||||||||:|||||.||||||.||::|.:.    
BL01104___yha    351 FFFTGARPEDPEAVFPHHHPKFDIDEKAMLIAAKVLANAAVSYQEKEQAV    400

BSNT_01718___    396 ----------    396
                               
BL01104___yha    401 RETPAMEQPK    410


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