Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04796 and BL01094

See DNA alignment / Visit BSNT_04796 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:01
# Commandline: needle
#    -asequence pep-align/BSNT_04796___pucH.1.5803.seq
#    -bsequence pep-align/BL01094___pucH.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04796___pucH-BL01094___pucH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04796___pucH-BL01094___pucH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04796___pucH
# 2: BL01094___pucH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 456
# Identity:     177/456 (38.8%)
# Similarity:   263/456 (57.7%)
# Gaps:          12/456 ( 2.6%)
# Score: 842.5
# 
#
#=======================================

BSNT_04796___      1 MAYDMVIKGAKAVTPDGVIEAEIAVQNGVIAEIGSDIEASGTEIIQADGK     50
                     |.:|.:||....:..:|..|.|:.:::|.||.||.|:..| .:||.|.|.
BL01094___puc      1 MNFDSIIKNGLVILENGEQEVEVGIKDGKIAAIGQDLGTS-AKIIDAKGS     49

BSNT_04796___     51 YVFPGVIDCHVHFNEPG---REDWEGFETGSQMMAAGGCTTYFDMPLNCI     97
                     .|.||:||.|||..|||   |::|||::||::..|.||.||:.:||||.:
BL01094___puc     50 IVSPGMIDAHVHITEPGGGYRDEWEGYDTGTRAAAKGGVTTFIEMPLNQV     99

BSNT_04796___     98 PSTVTAEHLLAKAELGRQKSAVDFALWGGLVPGHIE-DIRPMAEAGAIGF    146
                     |:||..|.:..|.:.|:.|.:||.|.:|||||..:: .|:.:...|.:.:
BL01094___puc    100 PATVDEESIQEKFKAGKGKLSVDVASYGGLVPFDLDGGIQELDSNGVVAY    149

BSNT_04796___    147 KAFLSKSG----TDEFRSVDERTLLKGMAEIAAAGKILALHAESDAITSY    192
                     |.||:..|    ..:|.:||:.:|.:||.:||..||||::|||:.|||..
BL01094___puc    150 KCFLATCGDRSIEGDFMNVDDYSLYEGMKQIAKTGKILSIHAENAAITDK    199

BSNT_04796___    193 LQMVLANKGKVDADAYAASRPEEAEVEAVYRTIQYAKVTGCPVHFVHIST    242
                     |..:.:..|:....||..|||...|||.:.:.|.:||.|||.||.|||:.
BL01094___puc    200 LGEIASKNGETSLRAYVDSRPVFTEVEPIRKIILFAKETGCRVHIVHIAC    249

BSNT_04796___    243 AKAVRLIREAKQEGLDVSVETCPHYVLFSHDDLRQRGSVAKCAPPLRSLQ    292
                     .:.|..|.:|:|||:|::.|||.||:.|..::|...|.|.||:||:|...
BL01094___puc    250 EEGVDEIVKAQQEGVDITCETCTHYLYFYKEELDHIGPVVKCSPPIREQS    299

BSNT_04796___    293 SKETLIETLIAGDIDMVSSDHSPCRPSLKREDNMFLSWGGISGGQFTLLG    342
                     ..|.:...::.|||..|:||||||.|.||..||.|.:||||:|.|..:..
BL01094___puc    300 RLEGMWNRVLNGDISFVTSDHSPCTPDLKATDNAFEAWGGIAGLQNNVDV    349

BSNT_04796___    343 MLELALE-HQIPFETIAEWTAAAPAKRFGLQKKGRLEAGCDADFVLVSME    391
                     :.:..:: ..:|....|...|..|||||.|..||.:..|.|||||.:..:
BL01094___puc    350 LFDEGVQKRNMPLSKFAAIIATNPAKRFNLASKGSIAVGKDADFVFIKKD    399

BSNT_04796___    392 -PYTVTRESMFAKHKKSIYEGHTFPCSIWTTYSKGRCVYNDGEKVTEIDG    440
                      ||.:..|.:..:||.|.|.|......:..|..:|..:|:..:.::....
BL01094___puc    400 APYELKAEDLAYRHKISPYIGRKIGAQVVKTILRGVEIYDKEKGISNEKV    449

BSNT_04796___    441 ALVVPS    446
                     ...:| 
BL01094___puc    450 GRFIP-    454


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