Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01755 and BL01086

See DNA alignment / Visit BSNT_01755 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:15
# Commandline: needle
#    -asequence pep-align/BSNT_01755.1.5803.seq
#    -bsequence pep-align/BL01086___yhfQ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01755-BL01086___yhfQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01755-BL01086___yhfQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01755
# 2: BL01086___yhfQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 327
# Identity:     183/327 (56.0%)
# Similarity:   221/327 (67.6%)
# Gaps:          50/327 (15.3%)
# Score: 936.0
# 
#
#=======================================

BSNT_01755         1 ---------------------------------------------MPEHP      5
                                                                  :...|
BL01086___yhf      1 MKHKYFAILFLLMISVMTACSGGSESTKTSGQDSVTVKHDLGETKVRNKP     50

BSNT_01755         6 KRVVVLELGFIDTLLDLGITPVGVADDNKAKQLINKDVLKKIDGYTSVGT     55
                     |:||||||||||.|||.||.|||:|||.|.| .||:.|..||.||||||:
BL01086___yhf     51 KKVVVLELGFIDALLDAGIKPVGIADDGKPK-FINEKVRGKIKGYTSVGS     99

BSNT_01755        56 RSQPSMQKIASLKPDLIIADTTRHKKVYDQLKKIAPTIALNNLNADYQDT    105
                     |:|||.:|||||||||||||::||..|||:|.||||||||.|||||||||
BL01086___yhf    100 RAQPSFEKIASLKPDLIIADSSRHSGVYDKLSKIAPTIALKNLNADYQDT    149

BSNT_01755       106 IDASLTIAKAVGKEKEMEKKLMAHEEKLSETKQKISANSQSVLLIGNTND    155
                     :|||||||||||||..|||||..|::||.|.|||..:..||:||:||||:
BL01086___yhf    150 LDASLTIAKAVGKESAMEKKLAEHKQKLDELKQKFGSRKQSILLLGNTNE    199

BSNT_01755       156 TIMARDENFFTSRLLTQVGYRYAISTSGNSDSSNGGDSVNMKMTLEQLLK    205
                     .|..||||||||:|||::||.|.:..||..|:.| |:|||:||||||||:
BL01086___yhf    200 EITVRDENFFTSQLLTKIGYTYGVGDSGKGDAEN-GESVNIKMTLEQLLE    248

BSNT_01755       206 TDPDVIILMTGKTDDLDADVKRPIEKNVLWKKLKAVKNGHVYHVDRAVWS    255
                     .|||||:||||:.|.:|.|.||||||:.|||||.|||||.||..||..||
BL01086___yhf    249 KDPDVIVLMTGEKDKVDEDGKRPIEKDPLWKKLSAVKNGKVYEADRFAWS    298

BSNT_01755       256 LRRSVDGANAILDELQKEMPAAKK---    279
                     ||||:|||:.::||:.:.:.:..:   
BL01086___yhf    299 LRRSIDGADELMDEIDQHLLSEDQKKS    325


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