Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00890 and BL01085
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:27
# Commandline: needle
# -asequence pep-align/BSNT_00890.1.5803.seq
# -bsequence pep-align/BL01085___ydeD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00890-BL01085___ydeD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00890-BL01085___ydeD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00890
# 2: BL01085___ydeD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 318
# Identity: 73/318 (23.0%)
# Similarity: 103/318 (32.4%)
# Gaps: 154/318 (48.4%)
# Score: 357.0
#
#
#=======================================
BSNT_00890 0 -------------------------------------------------- 0
BL01085___yde 1 MKSAHVKGVLMVLAGASLWGLSGSAAQFVFERGAADAGSLVSVRLLASGV 50
BSNT_00890 0 -------------------------------------------------- 0
BL01085___yde 51 ILLLYVSMKNGFQHVCQIWKKKTDICSILVFSIFGMLAVQYTFFASIEKG 100
BSNT_00890 1 ---------------------------------------------MLTNG 5
:||.|
BL01085___yde 101 NAAAAAILQYLAPFFVLFYLYVKKELPPKWKDAVLTLLALSGVFLLLTGG 150
BSNT_00890 6 SISQLSVPAAAVVWGVLSGFAAAFYTLYAVGLLNKFDSLVVVGWAMIIGG 55
....|.:||.|.|||||||.|.||||::|.||:..|.:|.|.||.|::||
BL01085___yde 151 RPDSLYIPAEAAVWGVLSGGALAFYTVFAGGLIQSFGALTVTGWGMLVGG 200
BSNT_00890 56 FALGFIHPPWQLDFQRLTAEAYAYILFVILFGTMIAFWFFIKSLESLSPK 105
....|:.||::.:...:.|...|.||||:|.||.:||..:|.||..||.|
BL01085___yde 201 AGFSFLFPPFRFNLSHIGAGEAAAILFVVLCGTALAFALYIGSLSYLSAK 250
BSNT_00890 106 ETSLLGSLEPLSAVVTTVVWLKAPFGSFQWIGAICIIGITLILALNKEPS 155
|||.|...|||:||:::.:||..||.:||..|.:.:|...:||:|::|
BL01085___yde 251 ETSCLSCAEPLAAVLSSALWLGVPFNAFQGAGTVMVIITVIILSLSRE-- 298
BSNT_00890 156 VQSEKSILKIRNHANRDI 173
.|..:..|..:
BL01085___yde 299 -------RKAADSVNERV 309
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