Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01724 and BL01071
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:12
# Commandline: needle
# -asequence pep-align/BSNT_01724___pbpF.1.5803.seq
# -bsequence pep-align/BL01071___pbpF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01724___pbpF-BL01071___pbpF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01724___pbpF-BL01071___pbpF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01724___pbpF
# 2: BL01071___pbpF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 716
# Identity: 514/716 (71.8%)
# Similarity: 606/716 (84.6%)
# Gaps: 6/716 ( 0.8%)
# Score: 2768.0
#
#
#=======================================
BSNT_01724___ 1 MFKIKKKKLFIPIIILVLTAFLALIGYISIIFLGHYVIDEKKLILHASSK 50
.:|:.||||||......|:|||||:|:|||.|||||||||.|||||
BL01071___pbp 1 ----MRKRFFIPIIITAAIFLLSLIGYITILFLGDYVIDEKKLIFHASSK 46
BSNT_01724___ 51 IVDQNGDEVASLYTENREPVSINEIPKQVREAFIAVEDKRFYEHHGIDAK 100
|||.||:||||||||||.||||.|:|..|:.|||||||||||||||||.|
BL01071___pbp 47 IVDHNGEEVASLYTENRRPVSIAEVPDNVKNAFIAVEDKRFYEHHGIDFK 96
BSNT_01724___ 101 SVGRAVYRDILAGGKVEGGSTITQQLAKNIFLTHDKTFLRKTKEVIIAIN 150
||.||||:|||||||||||||||||||||.|||:||||||||||||||||
BL01071___pbp 97 SVSRAVYKDILAGGKVEGGSTITQQLAKNTFLTNDKTFLRKTKEVIIAIN 146
BSNT_01724___ 151 LERDYSKDKLLEMYLNQLYFGHGVYGIQAASHYYFNKEVKDLTVSEGAVL 200
||||||||||||||||||||||||||||||::|:|||:||||||||||||
BL01071___pbp 147 LERDYSKDKLLEMYLNQLYFGHGVYGIQAAANYFFNKDVKDLTVSEGAVL 196
BSNT_01724___ 201 AAIPKAPSTYSPILHPDKNKERRDTILGMMNDQGYISAKEAVTAQGRTLG 250
|:||||||||||||:|:|::|||:.||||||:|||||:||.|.|||.|||
BL01071___pbp 197 ASIPKAPSTYSPILNPEKSRERRNVILGMMNEQGYISSKETVRAQGSTLG 246
BSNT_01724___ 251 LHVKKQSETPWFDSYIDLVIKEAEDKYSISGEQLLQGGYTIKVPLDSKLQ 300
||||::|:.||.|||||||:||||||||||.||||||||||.||||..:|
BL01071___pbp 247 LHVKEKSKNPWLDSYIDLVMKEAEDKYSISSEQLLQGGYTISVPLDVSIQ 296
BSNT_01724___ 301 KTAYQVMKEGSYYPGTDQNAEGSAVFINNKTGGVEAAIGGRDYTSKGYNR 350
|.||.:||:..|:||||..||||||||:|:||||.||:|||:|..|||||
BL01071___pbp 297 KAAYTLMKQDGYFPGTDNKAEGSAVFIDNRTGGVVAALGGREYAPKGYNR 346
BSNT_01724___ 351 VTAVRQPGSTFKPLAVYGPAMQEKKFKPYSLLKDELQSYGDYTPKNYDSR 400
.||.||||||||||||||||::||.|||||:|:|:..|||.|:|||||.:
BL01071___pbp 347 ATAQRQPGSTFKPLAVYGPALEEKLFKPYSMLEDKQLSYGGYSPKNYDGQ 396
BSNT_01724___ 401 YEGEVTMSDAITYSKNAPAVWTLNEIGVETGKSYLKANGIDIPDEGLALA 450
|.|:|:|.||:||||||||||||||||:||.|.||...|:::|||||||.
BL01071___pbp 397 YAGKVSMVDALTYSKNAPAVWTLNEIGIETVKPYLSRMGMNVPDEGLALG 446
BSNT_01724___ 451 LGGLEKGVSPLQLAGAFHTFAANGTYTEPFFISSIIDEDGETIADHKEEG 500
|||||||||||:||||:.|||.:|.|||||||..|.||:|:.:..|:|:.
BL01071___pbp 447 LGGLEKGVSPLELAGAYRTFANSGQYTEPFFIKKITDENGDVMFRHEEKS 496
BSNT_01724___ 501 KRVFSKQTSWNMTRMLQQVVKKGTATSGAYHGDLAGKTGSTSYTGVSGAT 550
::||||||:|||||||::|||.||..:|.:.|::|||||||:|||..|.|
BL01071___pbp 497 EKVFSKQTAWNMTRMLEEVVKSGTGKAGDFSGEIAGKTGSTTYTGKEGGT 546
BSNT_01724___ 551 KDAWFAGYTPKITGAVWMGYDKTDQNHYLKAGSSYPTRLFKDILTQAGET 600
||||||||||::||||||||||||::||||.||:||||||||||.:....
BL01071___pbp 547 KDAWFAGYTPEVTGAVWMGYDKTDESHYLKGGSAYPTRLFKDILKRTNHK 596
BSNT_01724___ 601 GHVFTKPKNIKDLESPIELKPVKTLTADYTFKAAGLFTIELKWDAQEDDR 650
...|..|:.:|||:.||.|:.::::.|||:|...||.|:.|||..|||.|
BL01071___pbp 597 PERFKAPEGVKDLDRPIRLEDLESVKADYSFTPMGLITVSLKWHEQEDKR 646
BSNT_01724___ 651 AVYRIYVNKDGEETLLDSVEGKGSYEIPYANLFSGASYKIVPYNTQTKRE 700
..||||..|:|:|||:|:|:||||:.|||||:||.|||||||||.|||.|
BL01071___pbp 647 VEYRIYERKNGKETLIDTVKGKGSFSIPYANIFSDASYKIVPYNPQTKTE 696
BSNT_01724___ 701 GEGTDYVQPKLFSS-- 714
|:|||||:||:|.|
BL01071___pbp 697 GKGTDYVEPKVFPSGH 712
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