Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05896 and BL01061
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:58
# Commandline: needle
# -asequence pep-align/BSNT_05896.1.5803.seq
# -bsequence pep-align/BL01061___dltE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05896-BL01061___dltE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05896-BL01061___dltE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05896
# 2: BL01061___dltE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 258
# Identity: 55/258 (21.3%)
# Similarity: 80/258 (31.0%)
# Gaps: 137/258 (53.1%)
# Score: 265.0
#
#
#=======================================
BSNT_05896 1 MKMTGNTVLITGGSAGIGLELAKRLLELGNEVIICGRSEARLAEAKQQLP 50
|:::|||||||||::|||...|:|.::.||.||:|||.|::|.|||::.|
BL01061___dlt 1 MELSGNTVLITGGASGIGFAFAERFIKAGNTVIVCGRRESKLKEAKEKHP 50
BSNT_05896 51 NIHTKQCDVADRSQREALYEWALKEYPNLNVLVNNAGIQKEIDFKKGQRI 100
.:.|..||||..::|.||:||..:.:|.:||||||||||:.....|...|
BL01061___dlt 51 ELITCVCDVAVETERLALFEWIKEHHPGVNVLVNNAGIQQRYHILKADVI 100
BSNT_05896 101 FLWTVMKLNLISKRLSIYPPFSHLI------------------------- 125
..|......: .:::..|. ||.
BL01061___dlt 101 DNWADYNKEI---TVNMEAPI-HLAMLFSRYFAEKAGKTAIINVSSGLAF 146
BSNT_05896 125 -------------------------------------------------- 125
BL01061___dlt 147 TPMAVAPIYSSTKAALHSFTMSLRHQLSEAGVEVIEVAPPAVNTDLGGVG 196
BSNT_05896 125 -------------------------------------------------- 125
BL01061___dlt 197 LHDSGAPLDEFADAIFKGLEEGRLEIGYAVSEKALRMSRDEIDESVSQLY 246
BSNT_05896 125 -------- 125
BL01061___dlt 247 SSLKHSIE 254
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