Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05896 and BL01061
See
Amino acid alignment /
Visit
BSNT_05896 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:58
# Commandline: needle
# -asequence dna-align/BSNT_05896.1.5803.seq
# -bsequence dna-align/BL01061___dltE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05896-BL01061___dltE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05896-BL01061___dltE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05896
# 2: BL01061___dltE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 816
# Identity: 238/816 (29.2%)
# Similarity: 238/816 (29.2%)
# Gaps: 489/816 (59.9%)
# Score: 532.0
#
#
#=======================================
BSNT_05896 1 ATGAAGATGACAGGCAATACGGTTTTAATCACAGGGGGTTCTGCTGGCAT 50
|||.|..||.|.||.||.||.||..|.||||||||.||..|..|.||.||
BL01061___dlt 1 ATGGAACTGTCGGGAAACACAGTGCTGATCACAGGCGGCGCATCGGGAAT 50
BSNT_05896 51 CGG----GCTTGAACTGGCC-------------AAGCGCCTGCTGGAGCT 83
||| |||| |.||| |||||
BL01061___dlt 51 CGGCTTTGCTT----TTGCCGAACGATTTATAAAAGCG------------ 84
BSNT_05896 84 CGGCAATGAAGTTATCATTTGCGGGCGCAGCG-AAGCACGTCTTGCAGAA 132
||.|||...||||||.|.||||||.|.||.| |||||.| |||..||||
BL01061___dlt 85 -GGAAATACCGTTATCGTCTGCGGGAGAAGGGAAAGCAAG-CTTAAAGAA 132
BSNT_05896 133 GCGAAGCAGCAGCTCCCAAACATCCATA-CAAAGCA-------ATGTGAT 174
||.|||.| .||||||||..| |..|.|| |||.|||
BL01061___dlt 133 GCAAAGGA--------AAAACATCCGGAGCTGATCACGTGTGTATGCGAT 174
BSNT_05896 175 GTTGCAGACCGTTCGCAGCGGGAA------GCATTGTATGAATGGGCTTT 218
|| |.||||| |.|.| |||| |||||.|.||||||| .|.
BL01061___dlt 175 GT----GGCCGTT-GAAAC-GGAACGACTGGCATTATTTGAATGG--ATC 216
BSNT_05896 219 AAAGGA-AT-ATCCGAACTTGAATGTTCTCGTCAACAACGCCGGCATTCA 266
||||.| || |||||....|.||.||.||.||.||.||.||.|||||.||
BL01061___dlt 217 AAAGAACATCATCCGGGAGTAAACGTACTTGTGAATAATGCGGGCATACA 266
BSNT_05896 267 AAAG------GAAATTGACTTTAAAAAGGGACAGAGGATCTTTTTG---- 306
..|| .|.|| |||||| ||..|||.||.|.|
BL01061___dlt 267 GCAGCGCTACCACAT----TTTAAA-------AGCCGATGTTATAGACAA 305
BSNT_05896 307 -TGG-------ACGGTGATGAAATTGAAC--TTAATTTCCAAGCGCCTGT 346
||| ||..|.|.||||| .|| |.|||.|..|.||||||.|
BL01061___dlt 306 TTGGGCTGACTACAATAAAGAAAT--CACCGTCAATATGGAGGCGCCTAT 353
BSNT_05896 347 CCATTTATCC--GCCCTTTTCACACC---TCATTTGA------------- 378
||||.|..|| ||.|||| |.| |..||||.
BL01061___dlt 354 CCATCTGGCCATGCTCTTT----AGCCGATACTTTGCCGAAAAAGCCGGG 399
BSNT_05896 378 -------------------------------------------------- 378
BL01061___dlt 400 AAAACTGCGATCATCAATGTGTCATCAGGGCTGGCGTTTACACCGATGGC 449
BSNT_05896 378 -------------------------------------------------- 378
BL01061___dlt 450 GGTCGCACCAATCTACTCATCGACAAAAGCCGCTCTCCACTCCTTTACGA 499
BSNT_05896 378 -------------------------------------------------- 378
BL01061___dlt 500 TGAGTTTAAGACACCAGCTTTCCGAGGCCGGCGTTGAGGTCATAGAAGTC 549
BSNT_05896 378 -------------------------------------------------- 378
BL01061___dlt 550 GCTCCTCCTGCGGTCAATACGGATCTGGGCGGTGTCGGACTGCATGATTC 599
BSNT_05896 378 -------------------------------------------------- 378
BL01061___dlt 600 CGGAGCTCCTTTGGATGAATTTGCCGATGCGATCTTTAAAGGGCTGGAAG 649
BSNT_05896 378 -------------------------------------------------- 378
BL01061___dlt 650 AAGGCCGGTTGGAAATCGGCTATGCCGTATCGGAAAAAGCCTTGCGGATG 699
BSNT_05896 378 -------------------------------------------------- 378
BL01061___dlt 700 TCAAGAGATGAAATCGATGAAAGCGTCAGCCAATTGTACAGTTCTTTAAA 749
BSNT_05896 378 ---------------- 378
BL01061___dlt 750 ACATTCCATCGAATAA 765
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.