Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00221 and BL01052
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:54
# Commandline: needle
# -asequence pep-align/BSNT_00221___rplD.1.5803.seq
# -bsequence pep-align/BL01052___rplD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00221___rplD-BL01052___rplD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00221___rplD-BL01052___rplD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00221___rplD
# 2: BL01052___rplD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 207
# Identity: 191/207 (92.3%)
# Similarity: 198/207 (95.7%)
# Gaps: 0/207 ( 0.0%)
# Score: 964.0
#
#
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BSNT_00221___ 1 MPKVALYNQNGSTAGDIELNASVFGIEPNESVVFDAILMQRASLRQGTHK 50
||||||||||||||||||||.|||||||||||||||||||||||||||||
BL01052___rpl 1 MPKVALYNQNGSTAGDIELNDSVFGIEPNESVVFDAILMQRASLRQGTHK 50
BSNT_00221___ 51 VKNRSEVRGGGRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYSYK 100
|||||||||||||||||||||||||||||||||||||:|||||||||:||
BL01052___rpl 51 VKNRSEVRGGGRKPWRQKGTGRARQGSIRSPQWRGGGIVFGPTPRSYAYK 100
BSNT_00221___ 101 LPKKVRRLAIKSVLSSKVIDNNIIVLEDLTLDTAKTKEMAAILKGLSVEK 150
||||||||||||.|||||.|||:||||||.||..|||||||||||||:||
BL01052___rpl 101 LPKKVRRLAIKSALSSKVNDNNLIVLEDLNLDAVKTKEMAAILKGLSIEK 150
BSNT_00221___ 151 KALIVTADANEAVALSARNIPGVTVVEANGINVLDVVNHEKLLITKAAVE 200
|||||||||||.|.|||||:|||||||||||||||||.||||::||||||
BL01052___rpl 151 KALIVTADANETVELSARNLPGVTVVEANGINVLDVVGHEKLVMTKAAVE 200
BSNT_00221___ 201 KVEEVLA 207
|||||||
BL01052___rpl 201 KVEEVLA 207
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