Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00225 and BL01047

See DNA alignment / Visit BSNT_00225 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:54
# Commandline: needle
#    -asequence pep-align/BSNT_00225___rplV.1.5803.seq
#    -bsequence pep-align/BL01047___rplV.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00225___rplV-BL01047___rplV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00225___rplV-BL01047___rplV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00225___rplV
# 2: BL01047___rplV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 114
# Identity:     106/114 (93.0%)
# Similarity:   111/114 (97.4%)
# Gaps:           1/114 ( 0.9%)
# Score: 523.0
# 
#
#=======================================

BSNT_00225___      1 -MQAKAVARTVRIAPRKARLVMDLIRGKQVGEAVSILNLTPRAASPIIEK     49
                      .||||||||||||||||||||||||||||||||||||.||:||||||||
BL01047___rpl      1 MQQAKAVARTVRIAPRKARLVMDLIRGKQVGEAVSILNHTPKAASPIIEK     50

BSNT_00225___     50 VLKSAIANAEHNYEMDANNLVISQAFVDEGPTLKRFRPRAMGRASQINKR     99
                     |||||||||||||||||||||::||:|:||||||||||||||||||||||
BL01047___rpl     51 VLKSAIANAEHNYEMDANNLVVTQAYVNEGPTLKRFRPRAMGRASQINKR    100

BSNT_00225___    100 TSHITIVVSEKKEG    113
                     ||||||||||||||
BL01047___rpl    101 TSHITIVVSEKKEG    114


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