Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00225 and BL01047
See
Amino acid alignment /
Visit
BSNT_00225 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:54
# Commandline: needle
# -asequence dna-align/BSNT_00225___rplV.1.5803.seq
# -bsequence dna-align/BL01047___rplV.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00225___rplV-BL01047___rplV.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00225___rplV-BL01047___rplV.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00225___rplV
# 2: BL01047___rplV
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 345
# Identity: 310/345 (89.9%)
# Similarity: 310/345 (89.9%)
# Gaps: 3/345 ( 0.9%)
# Score: 1411.0
#
#
#=======================================
BSNT_00225___ 1 ATG---CAAGCTAAAGCTGTTGCAAGAACAGTCCGTATTGCTCCTCGTAA 47
||| ||||||||||||||.|||||||||||||||||||||||||||||
BL01047___rpl 1 ATGCAACAAGCTAAAGCTGTCGCAAGAACAGTCCGTATTGCTCCTCGTAA 50
BSNT_00225___ 48 AGCACGTCTAGTAATGGACCTGATTCGAGGCAAGCAAGTAGGTGAGGCAG 97
.||||||||||||||||||||||||||||||||||||||||||||.||||
BL01047___rpl 51 GGCACGTCTAGTAATGGACCTGATTCGAGGCAAGCAAGTAGGTGAAGCAG 100
BSNT_00225___ 98 TATCAATCTTGAACCTTACACCAAGAGCTGCTTCTCCAATTATCGAGAAA 147
||||.|||||.||||.|||.||||.|||||||||.||.|||||.||.|||
BL01047___rpl 101 TATCGATCTTAAACCATACGCCAAAAGCTGCTTCCCCGATTATTGAAAAA 150
BSNT_00225___ 148 GTATTAAAATCCGCTATTGCAAATGCTGAGCATAACTATGAAATGGACGC 197
||.||||||||.|||||.||.||.||||||||.|||||.||||||||.||
BL01047___rpl 151 GTTTTAAAATCTGCTATCGCCAACGCTGAGCACAACTACGAAATGGATGC 200
BSNT_00225___ 198 TAACAACCTGGTTATTTCTCAAGCATTCGTTGACGAAGGCCCTACGTTAA 247
.||||||||||||.||.|||||||.|.|||..||||||||||||||||||
BL01047___rpl 201 AAACAACCTGGTTGTTACTCAAGCTTACGTGAACGAAGGCCCTACGTTAA 250
BSNT_00225___ 248 AAAGATTCCGCCCACGTGCTATGGGACGTGCGAGCCAAATCAACAAACGT 297
||||||||||.||.||.||||||||||||||.||||||||||||||||||
BL01047___rpl 251 AAAGATTCCGTCCGCGCGCTATGGGACGTGCAAGCCAAATCAACAAACGT 300
BSNT_00225___ 298 ACGAGCCACATTACAATCGTTGTATCAGAAAAGAAGGAGGGATAA 342
||||||||||||||.||||||||||||||||||||||||||||||
BL01047___rpl 301 ACGAGCCACATTACTATCGTTGTATCAGAAAAGAAGGAGGGATAA 345
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.