Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00232 and BL01039
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:55
# Commandline: needle
# -asequence pep-align/BSNT_00232___rplE.1.5803.seq
# -bsequence pep-align/BL01039___rplE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00232___rplE-BL01039___rplE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00232___rplE-BL01039___rplE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00232___rplE
# 2: BL01039___rplE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 179
# Identity: 173/179 (96.6%)
# Similarity: 175/179 (97.8%)
# Gaps: 0/179 ( 0.0%)
# Score: 869.0
#
#
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BSNT_00232___ 1 MNRLKEKYNKEIAPALMTKFNYDSVMQVPKIEKIVINMGVGDAVQNAKAI 50
||||||||||||.||||.||.|.|||||||||||||||||||||||||||
BL01039___rpl 1 MNRLKEKYNKEITPALMKKFEYKSVMQVPKIEKIVINMGVGDAVQNAKAI 50
BSNT_00232___ 51 DSAVEELTFIAGQKPVVTRAKKSIAGFRLREGMPIGAKVTLRGERMYDFL 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BL01039___rpl 51 DSAVEELTFIAGQKPVVTRAKKSIAGFRLREGMPIGAKVTLRGERMYDFL 100
BSNT_00232___ 101 DKLISVSLPRVRDFRGVSKKSFDGRGNYTLGIKEQLIFPEIDYDKVTKVR 150
||||||||||||||||:|||||||||||||||||||||||||||||||||
BL01039___rpl 101 DKLISVSLPRVRDFRGISKKSFDGRGNYTLGIKEQLIFPEIDYDKVTKVR 150
BSNT_00232___ 151 GMDIVIVTTANTDEEARELLTQVGMPFQK 179
||||||||||||||||||||||:||||||
BL01039___rpl 151 GMDIVIVTTANTDEEARELLTQLGMPFQK 179
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