Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00232 and BL01039
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:55
# Commandline: needle
# -asequence dna-align/BSNT_00232___rplE.1.5803.seq
# -bsequence dna-align/BL01039___rplE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00232___rplE-BL01039___rplE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00232___rplE-BL01039___rplE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00232___rplE
# 2: BL01039___rplE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 540
# Identity: 492/540 (91.1%)
# Similarity: 492/540 (91.1%)
# Gaps: 0/540 ( 0.0%)
# Score: 2268.0
#
#
#=======================================
BSNT_00232___ 1 ATGAACCGCCTTAAAGAAAAGTACAATAAAGAAATTGCACCTGCTTTAAT 50
||||||||||||||||||||||||||||||||||||.|||||||.|||||
BL01039___rpl 1 ATGAACCGCCTTAAAGAAAAGTACAATAAAGAAATTACACCTGCATTAAT 50
BSNT_00232___ 51 GACTAAGTTCAACTATGATTCAGTCATGCAAGTGCCTAAAATCGAAAAAA 100
||..||||||.|.||..|.||.||.|||||||||||||||||||||||||
BL01039___rpl 51 GAAAAAGTTCGAATACAAATCTGTGATGCAAGTGCCTAAAATCGAAAAAA 100
BSNT_00232___ 101 TCGTAATCAACATGGGTGTTGGTGACGCTGTTCAAAACGCCAAAGCAATC 150
||||||||||||||||||||||||||||||||||||||||.|||||.|||
BL01039___rpl 101 TCGTAATCAACATGGGTGTTGGTGACGCTGTTCAAAACGCTAAAGCTATC 150
BSNT_00232___ 151 GACAGTGCTGTTGAAGAATTAACGTTTATCGCAGGTCAAAAACCTGTCGT 200
||.||.||||||||||||.|||||||||||||.|||||.|||||||||||
BL01039___rpl 151 GATAGCGCTGTTGAAGAACTAACGTTTATCGCTGGTCAGAAACCTGTCGT 200
BSNT_00232___ 201 TACTCGTGCGAAGAAATCAATTGCTGGATTCCGTCTTCGTGAGGGAATGC 250
||||||||||||||||||.|||||||||||||||||||||||.|||||||
BL01039___rpl 201 TACTCGTGCGAAGAAATCTATTGCTGGATTCCGTCTTCGTGAAGGAATGC 250
BSNT_00232___ 251 CTATCGGTGCGAAAGTAACTCTTCGCGGAGAGCGCATGTATGATTTCCTT 300
|.||||||||||||||||||||||||||||||||||||||.|||||||||
BL01039___rpl 251 CAATCGGTGCGAAAGTAACTCTTCGCGGAGAGCGCATGTACGATTTCCTT 300
BSNT_00232___ 301 GATAAACTTATTTCTGTATCTTTACCGCGTGTACGTGACTTCCGCGGGGT 350
||||||||.||||||||.|||||||||||||||||||||||||||||..|
BL01039___rpl 301 GATAAACTAATTTCTGTTTCTTTACCGCGTGTACGTGACTTCCGCGGAAT 350
BSNT_00232___ 351 TTCTAAAAAATCTTTCGACGGTCGCGGTAACTACACACTTGGTATCAAAG 400
|||.|||||||||||.|||||||||||.|||||||||||.||.|||||||
BL01039___rpl 351 TTCAAAAAAATCTTTTGACGGTCGCGGAAACTACACACTAGGAATCAAAG 400
BSNT_00232___ 401 AACAGTTAATCTTCCCTGAAATTGACTACGATAAAGTAACAAAGGTTCGC 450
|||||.|.||||||||||||||||||||.|||||.|||||.||.||||||
BL01039___rpl 401 AACAGCTGATCTTCCCTGAAATTGACTATGATAAGGTAACTAAAGTTCGC 450
BSNT_00232___ 451 GGAATGGACATCGTTATCGTAACAACTGCTAATACTGACGAAGAAGCTCG 500
||.|||||.||||||||.|||||.|||||.||.|||||.|||||||||||
BL01039___rpl 451 GGTATGGATATCGTTATTGTAACGACTGCCAACACTGATGAAGAAGCTCG 500
BSNT_00232___ 501 TGAGCTATTAACTCAAGTAGGTATGCCGTTCCAGAAATAA 540
|||.||.|||||||||.||||||||||.||||||||||||
BL01039___rpl 501 TGAACTGTTAACTCAATTAGGTATGCCATTCCAGAAATAA 540
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