Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00235 and BL01036
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:55
# Commandline: needle
# -asequence pep-align/BSNT_00235___rplF.1.5803.seq
# -bsequence pep-align/BL01036___rplF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00235___rplF-BL01036___rplF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00235___rplF-BL01036___rplF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00235___rplF
# 2: BL01036___rplF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 179
# Identity: 167/179 (93.3%)
# Similarity: 172/179 (96.1%)
# Gaps: 1/179 ( 0.6%)
# Score: 845.0
#
#
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BSNT_00235___ 1 MSRVGKKLLEIPSDVTVTLNDNNTVAVKGPKGELTRTFHPDMEIKVEDNV 50
|||||||||||||.||||||| |||.||||||||||||||||:||:||||
BL01036___rpl 1 MSRVGKKLLEIPSGVTVTLND-NTVTVKGPKGELTRTFHPDMKIKIEDNV 49
BSNT_00235___ 51 LTVARPSDQKEHRALHGTTRSLLGNMVEGVSKGFERGLELVGVGYRASKS 100
|||.||||.||||||||||||::|||||||||||||||||||||||||||
BL01036___rpl 50 LTVERPSDNKEHRALHGTTRSIIGNMVEGVSKGFERGLELVGVGYRASKS 99
BSNT_00235___ 101 GNKLVLNVGYSHPVEIVPEEGIEIEVPSQTKVVVKGTDKERVGAIAANIR 150
|||||||||||||||||||.||||||||||||||||||||||||.|||||
BL01036___rpl 100 GNKLVLNVGYSHPVEIVPENGIEIEVPSQTKVVVKGTDKERVGATAANIR 149
BSNT_00235___ 151 AVRSPEPYKGKGIRYEGEVVRRKEGKSAK 179
||||||||||||||||||:||||||||||
BL01036___rpl 150 AVRSPEPYKGKGIRYEGEMVRRKEGKSAK 178
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