Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00236 and BL01035

See DNA alignment / Visit BSNT_00236 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:55
# Commandline: needle
#    -asequence pep-align/BSNT_00236___rplR.1.5803.seq
#    -bsequence pep-align/BL01035___rplR.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00236___rplR-BL01035___rplR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00236___rplR-BL01035___rplR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00236___rplR
# 2: BL01035___rplR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 120
# Identity:     106/120 (88.3%)
# Similarity:   113/120 (94.2%)
# Gaps:           0/120 ( 0.0%)
# Score: 534.0
# 
#
#=======================================

BSNT_00236___      1 MITKTSKNAARLKRHARVRAKLSGTAERPRLNVFRSNKHIYAQIIDDVNG     50
                     |||||||||||||||||||||||||.|||||||||||||||||:||||||
BL01035___rpl      1 MITKTSKNAARLKRHARVRAKLSGTPERPRLNVFRSNKHIYAQVIDDVNG     50

BSNT_00236___     51 VTLASASTLDKDLNVESTGDTSAATKVGELVAKRAAEKGISDVVFDRGGY    100
                     |||.||||||||.|.|:..||:||.||||||||||:||||::||||||||
BL01035___rpl     51 VTLVSASTLDKDFNAENGSDTAAAAKVGELVAKRASEKGITNVVFDRGGY    100

BSNT_00236___    101 LYHGRVKALADAAREAGLKF    120
                     ||||||||||||||||||:|
BL01035___rpl    101 LYHGRVKALADAAREAGLEF    120


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