Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00238 and BL01033

See DNA alignment / Visit BSNT_00238 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:55
# Commandline: needle
#    -asequence pep-align/BSNT_00238___rpmD.1.5803.seq
#    -bsequence pep-align/BL01033___rpmD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00238___rpmD-BL01033___rpmD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00238___rpmD-BL01033___rpmD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00238___rpmD
# 2: BL01033___rpmD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 59
# Identity:      57/59 (96.6%)
# Similarity:    58/59 (98.3%)
# Gaps:           0/59 ( 0.0%)
# Score: 280.0
# 
#
#=======================================

BSNT_00238___      1 MAKLEITLKRSVIGRPEDQRVTVRTLGLKKTNQTVVHEDNAAIRGMINKV     50
                     ||||||||||||||||||||:|||||||||||||||||||||||||||||
BL01033___rpm      1 MAKLEITLKRSVIGRPEDQRITVRTLGLKKTNQTVVHEDNAAIRGMINKV     50

BSNT_00238___     51 SHLVSVKEQ     59
                     ||||||||.
BL01033___rpm     51 SHLVSVKEL     59


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