Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00238 and BL01033

See Amino acid alignment / Visit BSNT_00238 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:55
# Commandline: needle
#    -asequence dna-align/BSNT_00238___rpmD.1.5803.seq
#    -bsequence dna-align/BL01033___rpmD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00238___rpmD-BL01033___rpmD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00238___rpmD-BL01033___rpmD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00238___rpmD
# 2: BL01033___rpmD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 180
# Identity:     168/180 (93.3%)
# Similarity:   168/180 (93.3%)
# Gaps:           0/180 ( 0.0%)
# Score: 792.0
# 
#
#=======================================

BSNT_00238___      1 ATGGCTAAATTAGAAATTACCCTCAAACGAAGTGTAATCGGTCGCCCGGA     50
                     |||||||||||||||||||||||||||||.|||||||||||.||||||||
BL01033___rpm      1 ATGGCTAAATTAGAAATTACCCTCAAACGCAGTGTAATCGGACGCCCGGA     50

BSNT_00238___     51 AGACCAACGCGTTACTGTAAGAACACTTGGTTTAAAGAAAACAAACCAAA    100
                     |||.||.|||.|||||||||||||.|||||||||||||||||||||||||
BL01033___rpm     51 AGATCAGCGCATTACTGTAAGAACGCTTGGTTTAAAGAAAACAAACCAAA    100

BSNT_00238___    101 CTGTTGTTCATGAAGACAACGCTGCGATCCGTGGTATGATTAATAAAGTA    150
                     ||||.||||||||||||||||||||.|||||.|||||||||||.||||||
BL01033___rpm    101 CTGTCGTTCATGAAGACAACGCTGCAATCCGCGGTATGATTAACAAAGTA    150

BSNT_00238___    151 TCTCATTTAGTTTCTGTTAAAGAACAATAA    180
                     |||||||||||||||||||||||||..|||
BL01033___rpm    151 TCTCATTTAGTTTCTGTTAAAGAACTTTAA    180


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