Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00240 and BL01031
See
DNA alignment /
Visit
BSNT_00240 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:55
# Commandline: needle
# -asequence pep-align/BSNT_00240___secY.1.5803.seq
# -bsequence pep-align/BL01031___secY.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00240___secY-BL01031___secY.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00240___secY-BL01031___secY.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00240___secY
# 2: BL01031___secY
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 431
# Identity: 362/431 (84.0%)
# Similarity: 394/431 (91.4%)
# Gaps: 0/431 ( 0.0%)
# Score: 1877.0
#
#
#=======================================
BSNT_00240___ 1 MFKTISNFMRVSDIRNKIIFTLLMLIVFRIGAFIPVPYVNAEALQAQSQM 50
|||||||||||.|||||||||||||||||:|:|||||:||.|.|:||.||
BL01031___sec 1 MFKTISNFMRVKDIRNKIIFTLLMLIVFRLGSFIPVPHVNTEVLKAQDQM 50
BSNT_00240___ 51 GVFDLLNTFGGGALYQFSIFAMGITPYITASIIIQLLQMDVVPKFTEWSK 100
.||.:|||||||||:.|||.||||.|||||||||||||||||||||||||
BL01031___sec 51 SVFGILNTFGGGALFNFSILAMGIMPYITASIIIQLLQMDVVPKFTEWSK 100
BSNT_00240___ 101 QGEVGRRKLAQFTRYFTIVLGFIQALGMSYGFNNLANGMLIEKSGVSTYL 150
||||||||||||||||||||||||||||||||||:|.|.||...||.|||
BL01031___sec 101 QGEVGRRKLAQFTRYFTIVLGFIQALGMSYGFNNMAGGALITDPGVGTYL 150
BSNT_00240___ 151 IIALVLTGGTAFLMWLGEQITSHGVGNGISIIIFAGIVSSIPKTIGQIYE 200
:||:|||.||||||||||||||||||||||||||||||:.||:||.|||.
BL01031___sec 151 LIAIVLTAGTAFLMWLGEQITSHGVGNGISIIIFAGIVAGIPQTINQIYA 200
BSNT_00240___ 201 TQFVGSNDQLFIHIVKVALLVIAILAVIVGVIFIQQAVRKIAIQYAKGTG 250
.|||.:.||||:.|:||.::::||||::|||||||||||||:||||||:|
BL01031___sec 201 QQFVDAGDQLFLQIIKVVVILVAILAIVVGVIFIQQAVRKISIQYAKGSG 250
BSNT_00240___ 251 RSPAGGGQSTHLPLKVNPAGVIPVIFAVAFLITPRTIASFFGTNDVTKWI 300
|||..|||||||||||||||||||||||||:.||||:|:|||:||||.||
BL01031___sec 251 RSPVPGGQSTHLPLKVNPAGVIPVIFAVAFITTPRTVATFFGSNDVTNWI 300
BSNT_00240___ 301 QNNFDNTHPVGMAIYVALIIAFTYFYAFVQVNPEQMADNLKKQGGYIPGV 350
|..||.||||||.:|.||||||||||||||||||||||||||||||||||
BL01031___sec 301 QKTFDYTHPVGMGVYAALIIAFTYFYAFVQVNPEQMADNLKKQGGYIPGV 350
BSNT_00240___ 351 RPGKMTQDRITSILYRLTFVGSIFLAVISILPIFFIQFAGLPQSAQIGGT 400
||||||||||||||||||||||||||||:|||:.|:..||||.|||||||
BL01031___sec 351 RPGKMTQDRITSILYRLTFVGSIFLAVIAILPVLFVNIAGLPSSAQIGGT 400
BSNT_00240___ 401 SLLIVVGVALETMKQLESQLVKRNYRGFMKN 431
|||||:||||||||||||||||||||||||:
BL01031___sec 401 SLLIVIGVALETMKQLESQLVKRNYRGFMKH 431
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.