Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00252 and BL01021

See DNA alignment / Visit BSNT_00252 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:56
# Commandline: needle
#    -asequence pep-align/BSNT_00252___ybaF.1.5803.seq
#    -bsequence pep-align/BL01021___ybaF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00252___ybaF-BL01021___ybaF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00252___ybaF-BL01021___ybaF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00252___ybaF
# 2: BL01021___ybaF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 265
# Identity:     207/265 (78.1%)
# Similarity:   233/265 (87.9%)
# Gaps:           0/265 ( 0.0%)
# Score: 1077.0
# 
#
#=======================================

BSNT_00252___      1 MMDSMIIGKYVPGTSLVHRLDPRTKLITIFLFVCIVFLANNVQTYALLGL     50
                     |||::||||||||.|::|||||||||:||||||.|||.|||.:|||||||
BL01021___yba      1 MMDNIIIGKYVPGKSVIHRLDPRTKLLTIFLFVFIVFFANNTETYALLGL     50

BSNT_00252___     51 FTIGVVSLTRVPFSFLMKGLKPIIWIVLFTFLLHILMTHEGPIIFQIGFF    100
                     ||:...:|:.||..||:||:||:.|||||||||||.||.|||::..:|.|
BL01021___yba     51 FTVAAAALSGVPVRFLIKGMKPVFWIVLFTFLLHIFMTREGPVLADLGLF    100

BSNT_00252___    101 KVYEGGLVQGIFISLRFVYLILITTLLTLTTTPIEITDGMEQLLNPLKKL    150
                     |:||.||||||||||||||||:|||:|||||||||:|||:|.||.|.|||
BL01021___yba    101 KIYEQGLVQGIFISLRFVYLIMITTILTLTTTPIEVTDGLEHLLGPFKKL    150

BSNT_00252___    151 KLPVHELALMMSISLRFIPTLMEETDKIMKAQMARGVDFTSGPVKERVKA    200
                     |||||||||||||||||||||:|||||||||||||||||.:|||||||||
BL01021___yba    151 KLPVHELALMMSISLRFIPTLIEETDKIMKAQMARGVDFANGPVKERVKA    200

BSNT_00252___    201 IVPLLVPLFVSAFKRAEELAVAMEARGYQGGEGRTKYRKLVWTGKDTSVI    250
                     ||||||||||||||||||||.|||||||:|||||||||:|.|..|||||:
BL01021___yba    201 IVPLLVPLFVSAFKRAEELATAMEARGYRGGEGRTKYRQLTWKWKDTSVL    250

BSNT_00252___    251 VSLIVLAALLFFLRA    265
                     :.|.||..||..||.
BL01021___yba    251 LILAVLGVLLILLRT    265


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