Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00252 and BL01021
See
Amino acid alignment /
Visit
BSNT_00252 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:56
# Commandline: needle
# -asequence dna-align/BSNT_00252___ybaF.1.5803.seq
# -bsequence dna-align/BL01021___ybaF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00252___ybaF-BL01021___ybaF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00252___ybaF-BL01021___ybaF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00252___ybaF
# 2: BL01021___ybaF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 825
# Identity: 571/825 (69.2%)
# Similarity: 571/825 (69.2%)
# Gaps: 54/825 ( 6.5%)
# Score: 1904.5
#
#
#=======================================
BSNT_00252___ 1 ATGATGGACAGCATGATTATCGGCAAGTATGTACCGGGGACTTCACTTGT 50
||||||||||..||.|||||||||||.||.|||||.||||..||..|..|
BL01021___yba 1 ATGATGGACAATATCATTATCGGCAAATACGTACCCGGGAAATCGGTCAT 50
BSNT_00252___ 51 TCACCGGCTTGACCCCAGAACAAAACTGATCACGATCTTTTTATTTGTCT 100
|||.|||||.||.||..|.|||||.|||.|.||.||.||..|.|||||||
BL01021___yba 51 TCATCGGCTCGATCCGCGTACAAAGCTGTTAACCATTTTCCTTTTTGTCT 100
BSNT_00252___ 101 GCATTGTATTCTTAGCCAATAATGTTCAGACATACGCGTTGCTTGGTTTA 150
..||.||.||.||.||.||||||....|.|||||.||.|||||.||..|.
BL01021___yba 101 TTATCGTTTTTTTCGCGAATAATACGGAAACATATGCATTGCTCGGCCTG 150
BSNT_00252___ 151 TTTACAATTGGCGTCGTTTCTTTAACAAGAGTTCC------TTTCTCTTT 194
|||||..|||..|.||...||||..||.|.||||| .||| |||
BL01021___yba 151 TTTACGGTTGCAGCCGCCGCTTTGTCAGGCGTTCCGGTGCGATTC-CTT- 198
BSNT_00252___ 195 TTTAATGAAAGGGCTGAAGCCAATCATCTGGATTGTCCTTTTTACGTTCC 244
||.|||||..|||||||..|..||||||||||.||.||||||||.|
BL01021___yba 199 ----ATAAAAGGAATGAAGCCGGTGTTCTGGATTGTGCTGTTTACGTTTC 244
BSNT_00252___ 245 TTCTTCACATCCTTATGACACATGAAGGACCGATTATC-----TTTCAAA 289
|.|||||.||..||||||||...|||||||||.||.|| |.||
BL01021___yba 245 TGCTTCATATTTTTATGACAAGGGAAGGACCGGTTCTCGCCGATCTC--- 291
BSNT_00252___ 290 TAGGTTTTTTCAAAGTCTATGA----GGGCGGTCTGGTTCAGGGGATATT 335
||..|.||.|||.|.||||| ||| ||.|||||.|||||.||
BL01021___yba 292 --GGCCTGTTTAAAATTTATGAACAGGGG----CTTGTTCAAGGGATTTT 335
BSNT_00252___ 336 CATTTCTCTTAGATTCGTCTATTTGATTTTAATCACAACTTTATTAACGC 385
.||||||||..|.||.||.||..|.||..|.||||||||..|.|||||..
BL01021___yba 336 TATTTCTCTGCGCTTTGTTTACCTCATCATGATCACAACGATTTTAACAT 385
BSNT_00252___ 386 TTACGACCACACCGATTGAGATTACCGATGGAATGGAGCAGCTGCTGAAC 435
|.|||||.||.||.||.||..|.||||||||..|||||||..||||....
BL01021___yba 386 TGACGACGACTCCAATCGAAGTGACCGATGGTTTGGAGCATTTGCTCGGT 435
BSNT_00252___ 436 CCATTGAAAAAATTAAAGCTTCCTGTTCATGAGCTGGCTCTTATGATGTC 485
||.||.||||||||.||||||||.||.|||||.||.|||||.||||||||
BL01021___yba 436 CCGTTTAAAAAATTGAAGCTTCCCGTCCATGAACTCGCTCTCATGATGTC 485
BSNT_00252___ 486 AATTTCTTTACGGTTTATTCCGACACTGATGGAGGAGACAGATAAGATCA 535
.||.||..|..|.|||||.|||||..||||.||.|||||.||||||||||
BL01021___yba 486 CATCTCCCTCAGATTTATACCGACTTTGATCGAAGAGACGGATAAGATCA 535
BSNT_00252___ 536 TGAAGGCTCAGATGGCGCGAGGCGTTGATTTTACAAGCGGGCCTGTCAAA 585
||||.||.||.|||||..|||||||.||||||.|.|.|||.||.||||||
BL01021___yba 536 TGAAAGCGCAAATGGCAAGAGGCGTCGATTTTGCGAACGGCCCGGTCAAA 585
BSNT_00252___ 586 GAAAGAGTGAAGGCTATTGTCCCGCTTCTTGTCCCGCTCTTCGTCAGCGC 635
|||.|.||.||.||.||.||.||.||.|||||||||||.||.|||||.||
BL01021___yba 586 GAACGCGTCAAAGCGATCGTTCCTCTCCTTGTCCCGCTTTTTGTCAGTGC 635
BSNT_00252___ 636 ATTTAAACGCGCCGAAGAGCTTGCGGTGGCAATGGAAGCAAGAGGCTATC 685
.||||||.|.||.|||||||||||....||.|||||.||..||||.|| |
BL01021___yba 636 CTTTAAAAGAGCTGAAGAGCTTGCAACCGCGATGGAGGCGCGAGGATA-C 684
BSNT_00252___ 686 A-AGGCGGAGAAGGACGTACGAAATATAGAAAGCTTGTATGGACAGGAAA 734
| .||.||||||||.|||||.|||||.||..||||...|||||.|.|.||
BL01021___yba 685 AGGGGAGGAGAAGGCCGTACAAAATACAGGCAGCTGACATGGAAATGGAA 734
BSNT_00252___ 735 AGACACTTCTGTCATTGTCAGCT--TAATTGTATTAGCT---------GC 773
.||.|||||.|| ||| |.||| |||||| |.
BL01021___yba 735 GGATACTTCCGT--------GCTCCTCATT---TTAGCTGTTCTTGGCGT 773
BSNT_00252___ 774 TTTGTTATTTTTCTTAAGGGCTTAG 798
||||.||.||||.||..||.|||||
BL01021___yba 774 TTTGCTAATTTTATTGCGGACTTAG 798
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.