Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00264 and BL01012
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:57
# Commandline: needle
# -asequence pep-align/BSNT_00264___gerD.1.5803.seq
# -bsequence pep-align/BL01012___gerD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00264___gerD-BL01012___gerD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00264___gerD-BL01012___gerD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00264___gerD
# 2: BL01012___gerD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 193
# Identity: 135/193 (69.9%)
# Similarity: 159/193 (82.4%)
# Gaps: 8/193 ( 4.1%)
# Score: 716.0
#
#
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BSNT_00264___ 1 MSKAKTLLMSCFLLLSVTACAPKDQAADMDYDQTKKMVVDILKTDDGKKA 50
|.|...|.:||||.||||||||.||||:||||||||||||||||||||||
BL01012___ger 1 MFKTAMLSISCFLFLSVTACAPTDQAAEMDYDQTKKMVVDILKTDDGKKA 50
BSNT_00264___ 51 IKELLNDDAMNEALVIDQDAIKGTIEKTLTSKKGEEFWKNIFEDTDFAEG 100
|:|:||||.:||.||:|:..:|.|:|||:|||||.||||.:|||..||||
BL01012___ger 51 IQEILNDDKLNETLVMDEKTVKETVEKTMTSKKGAEFWKKVFEDPKFAEG 100
BSNT_00264___ 101 FAKTLQTEHEKVIKKLMKDPDYQKMLMSVMQDPGMDKKYSQLAKSQEFRS 150
||||||.|||||:|||||||:||||||.|||||.|.|||.:|.:||||||
BL01012___ger 101 FAKTLQNEHEKVLKKLMKDPEYQKMLMQVMQDPEMAKKYGELVRSQEFRS 150
BSNT_00264___ 151 YLEEVINETLSSPLYKKQFEDELKKAAKDTAKESE-------- 185
:|:|||::||:||||:||||:||||||.::.||..
BL01012___ger 151 HLQEVISDTLTSPLYRKQFEEELKKAAAESMKEEMKGGEEKQS 193
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