Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00264 and BL01012
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:57
# Commandline: needle
# -asequence dna-align/BSNT_00264___gerD.1.5803.seq
# -bsequence dna-align/BL01012___gerD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00264___gerD-BL01012___gerD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00264___gerD-BL01012___gerD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00264___gerD
# 2: BL01012___gerD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 593
# Identity: 435/593 (73.4%)
# Similarity: 435/593 (73.4%)
# Gaps: 46/593 ( 7.8%)
# Score: 1577.0
#
#
#=======================================
BSNT_00264___ 1 ATG-TCAAAAGCCAAAACGCTATTGATGAGCTGTTTTTTGTTATTATCTG 49
||| ||||.| ||..||.|||||.|||.|||||||||.||||..||||||
BL01012___ger 1 ATGTTCAAGA-CCGCAATGCTATCGATAAGCTGTTTTCTGTTTCTATCTG 49
BSNT_00264___ 50 TAACAGCTTGCGCTCCAAAAGACCAAGCAGCGGATATGGACTATGATCAG 99
||||||||||.|||||.|..|||||||||||.||.||||||||||||||.
BL01012___ger 50 TAACAGCTTGTGCTCCCACGGACCAAGCAGCTGAGATGGACTATGATCAA 99
BSNT_00264___ 100 ACCAAAAAAATGGTTGTTGATATATTAAAAACTGATGATGGAAAGAAAGC 149
|||||||||||||||||.|||||||||||.||.|||||.|||||.|||||
BL01012___ger 100 ACCAAAAAAATGGTTGTCGATATATTAAAGACAGATGACGGAAAAAAAGC 149
BSNT_00264___ 150 TATTAAGGAATTATTAAATGATGATGCCA---TGAATGAAGCGCTGGTGA 196
.|||.|.|||.||||||||||||| || |.||||||.|.||.||.|
BL01012___ger 150 GATTCAAGAAATATTAAATGATGA---CAAATTAAATGAAACACTTGTAA 196
BSNT_00264___ 197 TTGACCAAGATGCAATTAAAGGAACAATAGAAAAAACACTCACATCTAAA 246
|.||..||.|..|..|.||||.|||..|.|||||||||.|.||.||.|||
BL01012___ger 197 TGGATGAAAAAACTGTCAAAGAAACCGTTGAAAAAACAATGACCTCCAAA 246
BSNT_00264___ 247 AAAGGTGAAGAATTTTGGAAAAACATCTTTGAAGACACTGATTTTGCTGA 296
|||||.|..||||||||||||||..||||||||||..|..|.||.|||||
BL01012___ger 247 AAAGGAGCTGAATTTTGGAAAAAAGTCTTTGAAGATCCAAAATTCGCTGA 296
BSNT_00264___ 297 GGGCTTTGCCAAAACTCTTCAGACAGAGCATGAAAAAGTGATTAAAAAGC 346
.||||||||||||||.|||||.|..||.||||||||||||.|.|||||.|
BL01012___ger 297 AGGCTTTGCCAAAACACTTCAAAATGAACATGAAAAAGTGCTGAAAAAAC 346
BSNT_00264___ 347 TGATGAAGGATCCAGATTACCAGAAGATGCTGATG-AGCGTTATGCAGGA 395
|||||||.|||||.||.|||||.||.||||||||| || ||.||||||||
BL01012___ger 347 TGATGAAAGATCCTGAGTACCAAAAAATGCTGATGCAG-GTCATGCAGGA 395
BSNT_00264___ 396 TCCCGGCATGGATAAAAAGTACAGCCAGCTGGCAAAAAGCCAAGAATTCC 445
|||.|..||||..|||||.|||.|..|.||.|..|.||||||.|||||||
BL01012___ger 396 TCCTGAAATGGCCAAAAAATACGGTGAACTTGTCAGAAGCCAGGAATTCC 445
BSNT_00264___ 446 GCAGTTATTTAGAAGAGGTTATTAAC-GAAACACTTTCTAGTCCGCTTTA 494
|.||..|..|..|.||.||.| ||.| ||.||.||..|.||.||.|||||
BL01012___ger 446 GAAGCCACCTGCAGGAAGTCA-TATCTGACACTCTGACAAGCCCTCTTTA 494
BSNT_00264___ 495 CAAAAAGCAGTTCGAAGATGAGCTGAAAAAAGC----------AGCA--A 532
||.|||||||||.|||||.||.||||||||||| |||| |
BL01012___ger 495 CAGAAAGCAGTTTGAAGAGGAACTGAAAAAAGCTGCTGCTGAAAGCATGA 544
BSNT_00264___ 533 AAGACACAGCCAAA-GAAA----GTGAATAA------------ 558
|||| || ||| |||| |.|||.||
BL01012___ger 545 AAGA---AG--AAATGAAAGGCGGCGAAGAAAAACAAAGCTGA 582
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