Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00266 and BL01011

See DNA alignment / Visit BSNT_00266 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:57
# Commandline: needle
#    -asequence pep-align/BSNT_00266___ybaN.1.5803.seq
#    -bsequence pep-align/BL01011___pdaB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00266___ybaN-BL01011___pdaB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00266___ybaN-BL01011___pdaB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00266___ybaN
# 2: BL01011___pdaB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 254
# Identity:     185/254 (72.8%)
# Similarity:   226/254 (89.0%)
# Gaps:           0/254 ( 0.0%)
# Score: 1025.0
# 
#
#=======================================

BSNT_00266___      1 MNHFYVWHIKRVKQLIIILIAAFAAASFFYIQRAVPLPVFSTDTGPKAIY     50
                     |||||||||||:||||||:|||||.|||||:|..:|||||||:.|.||:|
BL01011___pda      1 MNHFYVWHIKRIKQLIIIMIAAFATASFFYVQNLLPLPVFSTEGGAKAVY     50

BSNT_00266___     51 KGETDSKDISLTFDISWGDERAEPILNTLKANGIKNATFFLSASWAERHP    100
                     :|::|:.:::|||:|||||::|.|||:||||||||:||||||||||||||
BL01011___pda     51 RGDSDTNEVALTFNISWGDQKAMPILDTLKANGIKDATFFLSASWAERHP    100

BSNT_00266___    101 DTVARIVKDGHQIGSMGYAYKNYANLESSEIKKDMNRAQTAFEKLGVKDI    150
                     |.|.||.||||||||||||||||:.::.||||||:.:|:.:|:|||:.|:
BL01011___pda    101 DVVERIRKDGHQIGSMGYAYKNYSQMKKSEIKKDLAKARHSFQKLGLDDL    150

BSNT_00266___    151 QLLRPPTGQFNKNVLKVAKQYNYTVVHYSVNSQDWTNPGVEKIIDNVTKQ    200
                     .|||||||||||:||.|||||.|||||||:||.|||||||:||:.||...
BL01011___pda    151 TLLRPPTGQFNKDVLDVAKQYGYTVVHYSINSDDWTNPGVQKIVQNVNGT    200

BSNT_00266___    201 VSGGDIILLHASDSAKQTEEALPDIIHQLKEKGLKNVTVGDLIANSDAKS    250
                     |:.|||:|.|||||||||:||||:|:|.|:.||||||||.:||||:||||
BL01011___pda    201 VNAGDIVLFHASDSAKQTKEALPEIVHHLRSKGLKNVTVSELIANTDAKS    250

BSNT_00266___    251 AEVK    254
                     :|||
BL01011___pda    251 SEVK    254


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