Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00266 and BL01011

See Amino acid alignment / Visit BSNT_00266 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:57
# Commandline: needle
#    -asequence dna-align/BSNT_00266___ybaN.1.5803.seq
#    -bsequence dna-align/BL01011___pdaB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00266___ybaN-BL01011___pdaB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00266___ybaN-BL01011___pdaB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00266___ybaN
# 2: BL01011___pdaB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 797
# Identity:     553/797 (69.4%)
# Similarity:   553/797 (69.4%)
# Gaps:          64/797 ( 8.0%)
# Score: 1823.0
# 
#
#=======================================

BSNT_00266___      1 GTGAATCACTTCTATGTGTGGCACATTAAACGGGTGAAACAATTAATTAT     50
                     |||||.||.||.|||||||||||.||.||||||.|.||.||..||||.||
BL01011___pda      1 GTGAACCATTTTTATGTGTGGCATATCAAACGGATTAAGCAGCTAATCAT     50

BSNT_00266___     51 TATACTTATCGCCGCATTTGCAGCTGCCAGCTTTTTTTATATCCAAAGAG    100
                     |||..|.||.|||||.|||||..|.||.||.|||||||||.|.|||| |.
BL01011___pda     51 TATTATGATAGCCGCTTTTGCGACAGCAAGTTTTTTTTATGTGCAAA-AC     99

BSNT_00266___    101 CTG-TCCCGCTTCCCGTGTTTTCAACTGACACCGGACCTAAAGCCATTTA    149
                     ||| ||||.|||||.||||||||.||.||...||||.|.|||||..|.||
BL01011___pda    100 CTGCTCCCTCTTCCTGTGTTTTCTACAGAAGGCGGAGCAAAAGCGGTATA    149

BSNT_00266___    150 TAAAGGAGAAACAGATTCTAAAGATATTTCACTTACTTTCGATATCAGCT    199
                     ||.||||||..|||||.|.||.||..|..|.|||||.||..|||||||||
BL01011___pda    150 TAGAGGAGATTCAGATACAAATGAAGTAGCCCTTACATTTAATATCAGCT    199

BSNT_00266___    200 GGGGCGATGAGAGAGCAGAACCGATACTTAATACTC--TGAAAGCAAACG    247
                     ||||.|||.|.|..|||...||.||  ||.|.||.|  |.||||||||||
BL01011___pda    200 GGGGAGATCAAAAGGCAATGCCCAT--TTTAGACACATTAAAAGCAAACG    247

BSNT_00266___    248 GGATTAAAAATGCAACGTTTTTTCTTTCAGCTTCTTGGGCAGAACGCCAT    297
                     |.||||||.|.||.||.||||||||.||||||||.||||||||.|||||.
BL01011___pda    248 GTATTAAAGACGCGACCTTTTTTCTATCAGCTTCATGGGCAGAGCGCCAC    297

BSNT_00266___    298 CCCGACACAGTGGCCCGTA--------TCGTAAAGGACGGCCATCAAATC    339
                     ||.||     ||  .||||        .|||||| ||.||.||.||.|||
BL01011___pda    298 CCGGA-----TG--TCGTAGAAAGAATCCGTAAA-GATGGTCACCAGATC    339

BSNT_00266___    340 GGGAGCATGGGCTACGCTTATAAAAACTAT--GCCAATTTAGAGAGCAGC    387
                     |||||.||||||||.|||||||||||||||  ||.|||..|||.|  |||
BL01011___pda    340 GGGAGTATGGGCTATGCTTATAAAAACTATTCGCAAATGAAGAAA--AGC    387

BSNT_00266___    388 GAAATAAAAAAGGACATGAACCGTGCGCAAACAG---------CCTTTGA    428
                     ||.||.|||||.|||        |..||||| ||         |||||.|
BL01011___pda    388 GAGATCAAAAAAGAC--------TTAGCAAA-AGCACGACACTCCTTTCA    428

BSNT_00266___    429 AAAGTTAGGGGTCAAAGA-CATACAGCTATTAAGACCCCCTACCGGCCAA    477
                     |||..|.|||.|..|.|| |.||| |||.||||||||.||.||||||||.
BL01011___pda    429 AAAACTCGGGCTTGACGACCTTAC-GCTTTTAAGACCGCCGACCGGCCAG    477

BSNT_00266___    478 TTCAATAAGAATGTTCTAAAGGTCGCAAAGCAATACAATTATACAGTCGT    527
                     ||.|||||..|.||.||..|.||.||.||.||.|||...||.||.||.||
BL01011___pda    478 TTTAATAAAGACGTACTCGATGTTGCTAAACAGTACGGCTACACCGTTGT    527

BSNT_00266___    528 TCATTACAGTGTGAACTCTCAAGACTGGACAAATCCCGGAGTTGAAAAAA    577
                     ||||||.|||.|.|||||..|.||||||||.||.||.||.|||.||||.|
BL01011___pda    528 TCATTATAGTATTAACTCGGATGACTGGACGAACCCGGGGGTTCAAAAGA    577

BSNT_00266___    578 TCATCGACAATGTGACCAAGCAAGTTTCCGGT-------GGAGACATTAT    620
                     ||.||.|.||.||.|  |.|.||     ||||       ||.|||||..|
BL01011___pda    578 TCGTCCAAAACGTAA--ATGGAA-----CGGTAAACGCCGGTGACATCGT    620

BSNT_00266___    621 TCTTTTACATGCCTCCGATTCGGCAAAACAAACAGAAGAAGCATTGCCTG    670
                     .||.||.||.||.||.|||||.||.|||||||||.|||||||..||||.|
BL01011___pda    621 GCTCTTTCACGCTTCAGATTCCGCCAAACAAACAAAAGAAGCCCTGCCAG    670

BSNT_00266___    671 ATATCATCCATCAGCTGAAAGAA--AAAGGATTAAAAAATGTAACCGTGG    718
                     |.|||.|.||.||.||  .||||  ||.||..|.|||||.|||||.||..
BL01011___pda    671 AGATCGTGCACCATCT--CAGAAGCAAGGGGCTCAAAAACGTAACAGTCA    718

BSNT_00266___    719 GTGACCTCATCGCAAATTCTGATGCCAAATCCGCAGAGGTAAAGTAA    765
                     |.||..|.|||||||||.|.|||||.|||||..||||.||||||||.
BL01011___pda    719 GCGAATTAATCGCAAATACGGATGCAAAATCTTCAGAAGTAAAGTAG    765


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_00266 and BL01011

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
