Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01260 and BL00959
See
DNA alignment /
Visit
BSNT_01260 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:46
# Commandline: needle
# -asequence pep-align/BSNT_01260___yfmO.1.5803.seq
# -bsequence pep-align/BL00959___yfmO.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01260___yfmO-BL00959___yfmO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01260___yfmO-BL00959___yfmO.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01260___yfmO
# 2: BL00959___yfmO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 396
# Identity: 290/396 (73.2%)
# Similarity: 335/396 (84.6%)
# Gaps: 2/396 ( 0.5%)
# Score: 1486.0
#
#
#=======================================
BSNT_01260___ 1 MDKTTQVNQKTGLLSQPKAVWAVAFACVISFMGIGLVDPILPAIAAQLHA 50
...|..:.:.:..||||||||||||||||||||||||||||||.||||
BL00959___yfm 1 --MNEQPPENSSMFKQPKAVWAVAFACVISFMGIGLVDPILPAIAQQLHA 48
BSNT_01260___ 51 SPSEVSLLFTSYLLVTGFMMFFSGAISSRIGAKWTLILGLIFIIVFAGLG 100
|||:||||||||||||||.|..|||:|||||||.|||.|||.||||||||
BL00959___yfm 49 SPSQVSLLFTSYLLVTGFAMLLSGAVSSRIGAKLTLISGLILIIVFAGLG 98
BSNT_01260___ 101 GSSSSIAQLVGYRGGWGLGNALFISTALAVIVGVSVGGSAQAIILYEAAL 150
|.|.||:||||:|||||||||:||||||||||.|:.||||:|||||||||
BL00959___yfm 99 GLSHSISQLVGFRGGWGLGNAMFISTALAVIVSVASGGSAKAIILYEAAL 148
BSNT_01260___ 151 GLGISVGPLAGGELGSISWRAPFFGVSVLMFITLIAISFMLPKLPKPAKR 200
|||||||||||||||:||||||||||||||...|:||.|:||.:.||.|:
BL00959___yfm 149 GLGISVGPLAGGELGTISWRAPFFGVSVLMAAALLAIFFLLPPVQKPQKK 198
BSNT_01260___ 201 VGVFDAMKALKYKGLLTMAVSAFLYNFGFFILLAYSPFVLDLDEHGLGYV 250
:.|...:|||:||||||::.:|||||||||.|||||||||||:|.|||||
BL00959___yfm 199 ISVSAPIKALRYKGLLTLSGAAFLYNFGFFTLLAYSPFVLDLNERGLGYV 248
BSNT_01260___ 251 FFGWGLLLAITSVFTAPLVHKALGTVRSLVVLFIAFAAILVIMGIWTDHQ 300
||||||.|||||||.||.|.:..||||||::||:.|||.|:.:||||:|.
BL00959___yfm 249 FFGWGLFLAITSVFIAPAVQRIFGTVRSLILLFMLFAADLLAIGIWTEHM 298
BSNT_01260___ 301 TLIITCIVVAGAVLGMVNTIMTTAVMGSAPVERSIASSAYSSVRFIGGAL 350
.|:|..|::||.:|||:|||:|||||.:||||||:|||||||:||||||:
BL00959___yfm 299 ALVIGAIIIAGGILGMINTILTTAVMEAAPVERSVASSAYSSIRFIGGAI 348
BSNT_01260___ 351 APWIAGMLSEHFTASTPYTVGGIVVFVGMLVLLMGRKHLAGIKAGH 396
||||||:|::||||.|||..|.|.|..|:.||..||::||||||||
BL00959___yfm 349 APWIAGVLADHFTAHTPYFAGCIAVLAGIAVLAGGRRYLAGIKAGH 394
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.