Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04399 and BL00955
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:34
# Commandline: needle
# -asequence pep-align/BSNT_04399___bioD.1.5803.seq
# -bsequence pep-align/BL00955___bioD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04399___bioD-BL00955___bioD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04399___bioD-BL00955___bioD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04399___bioD
# 2: BL00955___bioD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 235
# Identity: 150/235 (63.8%)
# Similarity: 191/235 (81.3%)
# Gaps: 4/235 ( 1.7%)
# Score: 820.0
#
#
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BSNT_04399___ 1 MRGFFVTGTDTEVGKTVISSGLAALLKEHNRDVGVYKPFLSGISRHHPDS 50
|:|||||||||.||||.|:.||||||||.:.||||:||||||.....|.|
BL00955___bio 1 MKGFFVTGTDTGVGKTFIACGLAALLKEQHVDVGVFKPFLSGELASDPQS 50
BSNT_04399___ 51 DTSLLKDMSQTSLSHEDITPFAFKAPLAPYVAGKLEGKTVTMEEVLSHWG 100
||:|||:||:|.|:.|::|||.||.|||||.|.||||:||.:|:.::||.
BL00955___bio 51 DTALLKNMSETPLTDEEVTPFIFKEPLAPYTAAKLEGRTVGLEDAVNHWK 100
BSNT_04399___ 101 RIREKHECFIVEGAGGISVPLGEDYLVSHVIKALQLPMIIVARPHLGTIN 150
:|:::||||||||||||:|||||||.||.:||||.||.:|||||:|||||
BL00955___bio 101 KIKDRHECFIVEGAGGIAVPLGEDYFVSDLIKALDLPAVIVARPNLGTIN 150
BSNT_04399___ 151 HTFLTVKYAESMGLPIAGIIINGISDSPDEDEKTNPEMIERLCGVPILGV 200
||:||.:||:.||:.:.||:|||||..|..||:|||:||||.||||:|||
BL00955___bio 151 HTYLTAQYAKQMGIRVIGIVINGISSRPGLDEQTNPDMIERFCGVPLLGV 200
BSNT_04399___ 201 TPKLANVTKETVLHMVKDHINLSLLMNQMGV---- 231
||||.:.:...:.||:|||:::||:||||.:
BL00955___bio 201 TPKLEDASPTQIHHMIKDHVDVSLIMNQMQMGAEK 235
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