Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05912 and BL00952
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:59
# Commandline: needle
# -asequence pep-align/BSNT_05912___yxlH.1.5803.seq
# -bsequence pep-align/BL00952___yxlH.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05912___yxlH-BL00952___yxlH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05912___yxlH-BL00952___yxlH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05912___yxlH
# 2: BL00952___yxlH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 420
# Identity: 210/420 (50.0%)
# Similarity: 281/420 (66.9%)
# Gaps: 23/420 ( 5.5%)
# Score: 1077.5
#
#
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BSNT_05912___ 1 MELQQDLIPQKKTIGALDHAVFLCMVFCFWFSGYIYVPVFSLYLEDLHFS 50
||.|:.::.::|.|...||.:|...||||||:.|||||||.|||:::.||
BL00952___yxl 1 MERQKQIVYEEKQILRKDHMIFWGAVFCFWFATYIYVPVFGLYLDNIGFS 50
BSNT_05912___ 51 YGAIGIILGSYGVTQILLRFPLGLLSDILFSLRKQLLIAGFGFSVLSSLL 100
|.||||:||||||||||||||.|:|||:|..|||||||:||..|:||..:
BL00952___yxl 51 YSAIGIVLGSYGVTQILLRFPFGILSDVLSPLRKQLLISGFAMSLLSCCI 100
BSNT_05912___ 101 FLMFDSFFFVLAARLFAGITASTWVMATILYAHYFNNGNASKAMGIMQFF 150
||:.|||..|:.|||.||:||:.|||||:||:.||....:||||||:||.
BL00952___yxl 101 FLLSDSFIMVITARLLAGMTAAMWVMATVLYSQYFTKDQSSKAMGILQFL 150
BSNT_05912___ 151 TVMPQFASIVFCGLAAAHLGRQVPFWMALAASAAGLVICCFIQDPSAPPA 200
||:|||.|:...|......|...|||:.:|.|..||::..:|:| :.|..
BL00952___yxl 151 TVLPQFISMAVSGYLVHLFGWMFPFWIGVAVSCIGLILSFYIKD-NGPRH 199
BSNT_05912___ 201 NRGTIRVNQYIKDTLRLPKLKLFTILSMTAHAVLFITVFGFTPLYMNQLG 250
....:.::.|:|.|||||.||..|.||..||||||:|||||||:|...:|
BL00952___yxl 200 TAKGMALSDYVKQTLRLPDLKAITTLSFLAHAVLFMTVFGFTPIYAESVG 249
BSNT_05912___ 251 MGDAELLWVMSAFFLPHAAATLSFVLLRFTSRIAYFVMLISFAVTGVCLL 300
:.:.:|:|||.|||:|...|::..:. :..:.|..::.||:.:|.|...
BL00952___yxl 250 IDEKQLIWVMFAFFVPQTLASVWCIF--YKVKAADALIWISYVITAVFFC 297
BSNT_05912___ 301 YVPFSAALFTVCITHACIGLALGFVFPLLLSHVVEISSARLKMSVMGFYQ 350
.:||:..||.|||.||..||.|||:||||:|.||::.:.:||||||||||
BL00952___yxl 298 LLPFAETLFAVCIVHAVTGLTLGFIFPLLVSKVVQLGTPQLKMSVMGFYQ 347
BSNT_05912___ 351 SFYALGIFLGPLLAGKIAQLVGLAGVFYGAGSLAFAAFFVMLAQKRNMIN 400
||||||.||||::|||:|:|.||..||:.||:|:.||..:||..|:..|.
BL00952___yxl 348 SFYALGFFLGPVVAGKVAELFGLPKVFWFAGALSLAAACIMLFSKQFRIF 397
BSNT_05912___ 400 -------------------- 400
BL00952___yxl 398 TAGRRDKSSNIVQPTKVFRK 417
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