Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05820 and BL00946

See DNA alignment / Visit BSNT_05820 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:53
# Commandline: needle
#    -asequence pep-align/BSNT_05820___ywcJ.1.5803.seq
#    -bsequence pep-align/BL00946___ywcJ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05820___ywcJ-BL00946___ywcJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05820___ywcJ-BL00946___ywcJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05820___ywcJ
# 2: BL00946___ywcJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 262
# Identity:     162/262 (61.8%)
# Similarity:   206/262 (78.6%)
# Gaps:           6/262 ( 2.3%)
# Score: 892.0
# 
#
#=======================================

BSNT_05820___      1 METQALQKVEQYALKKQNIFASSKIRYVLRSILASMFIGFGITAASKTGS     50
                     ||:::|..||:.|||||:||..|.:||:||::|||||||||:..|.|||:
BL00946___ywc      1 MESKSLVLVEELALKKQSIFVQSPLRYLLRAMLASMFIGFGVIVAFKTGN     50

BSNT_05820___     51 YFFMADSPFAFPAAAVTFGAAILLIAYGGGDLFTGNTFYFTYTALRKKLS    100
                     .|::..|||.:|.||:|||.||:||.|||||||||||||:|..|||||:.
BL00946___ywc     51 LFYVEHSPFTYPIAAITFGGAIILIVYGGGDLFTGNTFYYTLAALRKKMR    100

BSNT_05820___    101 WRNTLYLWMSSYAGNLIGAILFAILISATGLFEEPSVHSFLIHLAEHKME    150
                     |...:.|||.||||||:||:.||.||.|||||::||...|::.:|||||.
BL00946___ywc    101 WPTVIKLWMFSYAGNLMGAVFFAGLIFATGLFKDPSSTGFILSVAEHKMN    150

BSNT_05820___    151 PPASELFFRGMLCNWLVCLAFFIPMSLKGEGAKLFTMMLFVFCFFISGFE    200
                     .|.:||||:.:|||||||||||:||:.||:|||:|:||||||.|||||:|
BL00946___ywc    151 TPVTELFFKAILCNWLVCLAFFVPMAQKGDGAKMFSMMLFVFTFFISGYE    200

BSNT_05820___    201 HSIANMCTFAISLLIEHPDTVTLMGAVRNLIPVTLGNLTAGIVMMGWMYY    250
                     ||||||.|||:||:.|||:|:::.||:.||||||||||..|..|||:||:
BL00946___ywc    201 HSIANMATFAVSLVTEHPETISIAGAIHNLIPVTLGNLVGGAFMMGFMYH    250

BSNT_05820___    251 TLNPDQ------    256
                     ..|...      
BL00946___ywc    251 YANKPGGEEIIK    262


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.