Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05913 and BL00943

See DNA alignment / Visit BSNT_05913 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:59
# Commandline: needle
#    -asequence pep-align/BSNT_05913___yxlG.1.5803.seq
#    -bsequence pep-align/BL00943___yxlG.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05913___yxlG-BL00943___yxlG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05913___yxlG-BL00943___yxlG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05913___yxlG
# 2: BL00943___yxlG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 258
# Identity:     122/258 (47.3%)
# Similarity:   172/258 (66.7%)
# Gaps:           0/258 ( 0.0%)
# Score: 659.0
# 
#
#=======================================

BSNT_05913___      1 MKVMMALLQKEWLEGWKSGKLIWLPIAMMIVGLTQPLTIYYMPEIIAHGG     50
                     |.....|.||||.|.|:.|||:|||:.::::||.|||::||||:||...|
BL00943___yxl      1 MNSFFMLFQKEWTERWRDGKLLWLPVILILLGLIQPLSLYYMPQIIDMAG     50

BSNT_05913___     51 NLPDGMKISFTMPSGSEVMVSTLSQFNTLGMALVIFSVMGSVANERNQGV    100
                     |||:|..|....|.|.|||.||||||.|:|.|:.:||||||:.:|||||.
BL00943___yxl     51 NLPEGSVIDIPRPRGEEVMASTLSQFGTVGTAIFVFSVMGSIVHERNQGS    100

BSNT_05913___    101 TALIMSRPVTAAHYIVSKWLIQSVIGIMSFAAGYGLAYYYVRLLFEDASF    150
                     .:|:|:|||:...||.||||.|.::.::||||.||||:||..|||....|
BL00943___yxl    101 LSLVMARPVSPLQYIGSKWLQQVLLVLVSFAASYGLAFYYTNLLFGKVEF    150

BSNT_05913___    151 SRFAASLGLYALWVIFIVTAGLAGSTIFRSVGAAAACGIGLTAAVSFVVS    200
                     .||..||.:|::|:||:::..:..|.:||.:|..|...|...|.||...|
BL00943___yxl    151 DRFLFSLSVYSIWIIFVMSVTMFFSALFRHIGGIAGMSICFIAFVSLAGS    200

BSNT_05913___    201 LFPDGAKWLPAEICKQAEHILLHGERADFFGWSLTFSILYIMLLAVFSVW    250
                     |||...:|:|.:...||::.::||.....|||.:..|:..::||.:.:|:
BL00943___yxl    201 LFPRFTEWMPDKAKSQADYFIMHGSWDHAFGWMVFSSLGIVILLFMCTVF    250

BSNT_05913___    251 RFRRYESY    258
                     .|:|||||
BL00943___yxl    251 VFKRYESY    258


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