Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05913 and BL00943
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:00
# Commandline: needle
# -asequence dna-align/BSNT_05913___yxlG.1.5803.seq
# -bsequence dna-align/BL00943___yxlG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05913___yxlG-BL00943___yxlG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05913___yxlG-BL00943___yxlG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05913___yxlG
# 2: BL00943___yxlG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 906
# Identity: 490/906 (54.1%)
# Similarity: 490/906 (54.1%)
# Gaps: 258/906 (28.5%)
# Score: 1133.0
#
#
#=======================================
BSNT_05913___ 1 ATGAAGGTGA----TGATGGCGCTATTGCAGAAGGAGTGGCTGGAAGGAT 46
||||| .|.| |.|| |.||||.||.||.||.|||..||||.|||
BL00943___yxl 1 ATGAA-TTCATTTTTTAT---GTTATTTCAAAAAGAATGGACGGAAAGAT 46
BSNT_05913___ 47 GGAAAAGCGGCAAGCTGATTTGGCTGCCGATTGCGATGATGATCGT--CG 94
|||.|..|||.||||||.|||||||||| ||..||..|||||.| .|
BL00943___yxl 47 GGAGAGACGGAAAGCTGCTTTGGCTGCC---TGTCATTTTGATCCTTCTG 93
BSNT_05913___ 95 GGC-TGACACAGCCGCTGACCATTTATTATATGCCGGAAATCATCGCACA 143
||| |||..||||||||.|.|.|.|||||||||||..||||.|||| |.|
BL00943___yxl 94 GGCTTGATTCAGCCGCTCAGCCTGTATTATATGCCTCAAATTATCG-ATA 142
BSNT_05913___ 144 TGG-AGGGAACCTTCCTGACGGCATGAAAATCAGTTTTACGAT-GCCCT- 190
||| .|||||..|.|||||.|| |||.|| ||| |.|.|
BL00943___yxl 143 TGGCCGGGAATTTGCCTGAGGG-------ATCCGT-----GATCGACATA 180
BSNT_05913___ 191 ------CCG---GGTCTGAA---GTGATGGTCAGCACGCTT-TCTCAATT 227
||| || |||| ||.||||..||||| ||| ||.||.||
BL00943___yxl 181 CCAAGGCCGAGAGG--TGAAGAGGTAATGGCGAGCAC-CTTGTCCCAGTT 227
BSNT_05913___ 228 CAACACGCTTGGCATGGCTCTGGTCATCTTTAGCGTGATGGGCAGTGTAG 277
|..||||.||||.|.|||..|..||.|.||.||.|||||||||||..|.|
BL00943___yxl 228 CGGCACGGTTGGTACGGCAATTTTCGTTTTCAGTGTGATGGGCAGCATTG 277
BSNT_05913___ 278 CCAATGAAAGAAATCAAGGGGTAACAGCGC------TGATTATGTCGCGG 321
.|.|.|||.||||.||||| |.|.| ||.|.|||.||.|.
BL00943___yxl 278 TCCACGAACGAAACCAAGG------ATCCCTTTCATTGGTGATGGCGAGA 321
BSNT_05913___ 322 CCTGTGACGGCAGCC-----CATTATATCGTGAGTAAATGGCTCATCCAA 366
||||| ||||| ||.|||||||..||.||.||||| ||
BL00943___yxl 322 CCTGT-----CAGCCCGCTTCAGTATATCGGCAGCAAGTGGCT--TC--- 361
BSNT_05913___ 367 AGC--GTG--------ATCGGCATTATGTCGTTTGCAGCTGGATACG--- 403
||| ||| ||.|| |.||||||||.||..|.||||
BL00943___yxl 362 AGCAGGTGCTGCTCGTATTGG-----TTTCGTTTGCTGCAAGCTACGGTT 406
BSNT_05913___ 404 -GGCTTGCTTACTAT-----TACGTCCGGCTGCTGTTTG---AGGACGCA 444
|||||.| |||||| | |||||.||.| |||..|.|
BL00943___yxl 407 TGGCTTTC-TACTATACAAAT--------CTGCTATTCGGCAAGGTTGAA 447
BSNT_05913___ 445 TCATTCAGCCGCTTTGCCGCAAGCCTTGGCCTTTA-------CGCG---- 483
| ||.| |||.||| || .|||| ||.|
BL00943___yxl 448 T--TTGA-CCGGTTT----------TT---ATTTAGTTTATCCGTGTACA 481
BSNT_05913___ 484 --CTTTGGGTGATATTTAT--TGTGACCGCCGGCCTTGCCGGAAGTACGA 529
.|.|||.|.||||||.| ||| |||.| ||||
BL00943___yxl 482 GTATATGGATTATATTTGTCATGT------CGGTC-----------ACGA 514
BSNT_05913___ 530 TATT-----CCGGTCTG----------TCGGAGCAGCTGCGGCTTGCGGG 564
|.|| ..|.|||| |||| |.||.||||.||
BL00943___yxl 515 TGTTTTTCAGTGCTCTGTTTCGCCATATCGG-------GGGGATTGCCGG 557
BSNT_05913___ 565 -------ATCGGGCTCACAGCAGCCGTTTCCTTTGTTGTTTCATTATTT- 606
|||.|..|||..||...||||||.||.|..|..||.||||||
BL00943___yxl 558 CATGAGCATCTGTTTCATCGCCTTCGTTTCATTGGCGGGATCCTTATTTC 607
BSNT_05913___ 607 CCAGATGGTGCGAAGTGGCTTCCGGCTGAGATTTGC---AAG-CAGGCGG 652
||.|.|....|||| |||.|.||.|.|.|| || ||| |||||.|
BL00943___yxl 608 CCCGCTTTACCGAA-TGGATGCCTGATAAG----GCGAAAAGCCAGGCTG 652
BSNT_05913___ 653 AGCA---TATCCTTC----TTCATGGAGAGCGGGCAGATTTTTTC----G 691
|..| ||||.|.| ||||||| ||.| ||..|||| |
BL00943___yxl 653 ATTATTTTATCATGCACGGTTCATGG-GACC------ATGCTTTCGGCTG 695
BSNT_05913___ 692 GATGGTCACTCACTTTCTCCATT-----CTGTACATCATGCTTCTGGCCG 736
|||||| ..||||..|.|| .|||| ||.|||.||..|.
BL00943___yxl 696 GATGGT-----GTTTTCGTCTTTGGGAATTGTA----ATTCTTTTGTTCA 736
BSNT_05913___ 737 TGT------TTTCTGTGTGGCGCTTCCGGCGGTATGAAAGCTATTAA--- 777
||| |||.||| .|.|.||||.|||.||
BL00943___yxl 737 TGTGCACCGTTTTTGT---------------TTTTAAAAGATATGAATCT 771
BSNT_05913___ 777 ------ 777
BL00943___yxl 772 TACTAA 777
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