Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05922 and BL00940
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:00
# Commandline: needle
# -asequence pep-align/BSNT_05922___sigY.1.5803.seq
# -bsequence pep-align/BL00940___sigY.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05922___sigY-BL00940___sigY.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05922___sigY-BL00940___sigY.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05922___sigY
# 2: BL00940___sigY
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 178
# Identity: 106/178 (59.6%)
# Similarity: 141/178 (79.2%)
# Gaps: 1/178 ( 0.6%)
# Score: 596.0
#
#
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BSNT_05922___ 1 MDTQEEQRLIQQAKEGNDEAFTALFHYHYSFLYKYLLKLSLHPDLSEELV 50
||..:|:.||.:||:|.|.|||.||..||.|:|:|:|||:|:|||:|:||
BL00940___sig 1 MDQADEKELIIRAKDGEDAAFTKLFQLHYPFVYQYVLKLTLNPDLTEDLV 50
BSNT_05922___ 51 QETFLKGYIHLRSFQGRSKFSTWLISIASRLYLDHQKKRKREWKRNQTVT 100
|||.||.|:.|..|||.:|||||||||||||::|||:::|||.::.|...
BL00940___sig 51 QETMLKAYVSLHQFQGNAKFSTWLISIASRLFIDHQRRKKRENRKTQAAG 100
BSNT_05922___ 101 EETIRKIKWDVSAKGAEWSETLDLFSKLDPKLRTPVLLRHYYGYTYAEIG 150
||.:||:||:.:..|.||||.|::|:.|:|:.|.|:|||||||:||.|:.
BL00940___sig 101 EEALRKMKWNSALHGHEWSEYLEMFAALEPEFRMPILLRHYYGFTYPEVA 150
BSNT_05922___ 151 MMLQIKEGTVKSRVHKGLQQIRKEWDDE 178
.||:|||||||||||.||::|||||..
BL00940___sig 151 NMLKIKEGTVKSRVHHGLKKIRKEWGQ- 177
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