Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05930 and BL00925

See DNA alignment / Visit BSNT_05930 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:00
# Commandline: needle
#    -asequence pep-align/BSNT_05930___cydC.1.5803.seq
#    -bsequence pep-align/BL00925___cydC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05930___cydC-BL00925___cydC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05930___cydC-BL00925___cydC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05930___cydC
# 2: BL00925___cydC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 574
# Identity:     413/574 (72.0%)
# Similarity:   477/574 (83.1%)
# Gaps:           7/574 ( 1.2%)
# Score: 2122.5
# 
#
#=======================================

BSNT_05930___      1 MGKDLFRYKGMKRILTLITCLTLIQTAAIIMQAEWLSEALTGLFNGKGIT     50
                     |||||.:||||||||.::|.||.:|.||||||||||:||:|.||||:.:.
BL00925___cyd      1 MGKDLLQYKGMKRILAVLTVLTCMQGAAIIMQAEWLAEAVTRLFNGERVG     50

BSNT_05930___     51 SLFPVISFFLIAFIARHGVTVARQKIVYQYAARTGADLRKSFLDQLFRLG    100
                     ||||::..|..||:.||.||:.|||:::.|||.|||.:||.||::||:.|
BL00925___cyd     51 SLFPLLILFTAAFLFRHAVTLVRQKLIFDYAAETGAGMRKKFLEKLFQSG    100

BSNT_05930___    101 PRFAKKEGTGQMVTLAMEGISQFRRYLELFLPKMVSMAIVPAAVVIYVFF    150
                     ||.|:|||||.:||||||||:|||||||||||||||||::|.|||.||||
BL00925___cyd    101 PRLARKEGTGHVVTLAMEGIAQFRRYLELFLPKMVSMAVIPPAVVCYVFF    150

BSNT_05930___    151 QDRTSAIILVAAMPILIIFMILLGLVAQRKADRQWKSYQRLSNHFVDSLR    200
                     :|.:||.:|:..|||||.||||||..|:||||.|||:|:.|||||.||||
BL00925___cyd    151 KDTSSAAVLMITMPILITFMILLGYAAKRKADSQWKTYEMLSNHFTDSLR    200

BSNT_05930___    201 GLETLRFLGLSKSHSKNIFYVSERYRKATMSTLRVAFLSSFALDFFTMLS    250
                     |||||:.||:|:||:||||:|||||||||||||::|||||||||||||||
BL00925___cyd    201 GLETLKVLGISRSHTKNIFHVSERYRKATMSTLKIAFLSSFALDFFTMLS    250

BSNT_05930___    251 VATVAVFLGLRLIDGDILLGPALTALILAPEYFLPVREVGNDYHATLNGQ    300
                     ||||||||||.|:||.|.|.|||..||||||:|||||||||||||||||:
BL00925___cyd    251 VATVAVFLGLGLVDGSISLEPALAILILAPEFFLPVREVGNDYHATLNGR    300

BSNT_05930___    301 EAGKTIQEILSQPGFKEETPLQLEDWSDQDELKLSGVSVGR------SVS    344
                     ||||.|:.||..||||:|.||.||.|||.|:::...|.|..      |:|
BL00925___cyd    301 EAGKAIKAILDSPGFKDEAPLSLERWSDDDQIEFKHVDVRHEDEENCSLS    350

BSNT_05930___    345 DIHLSFKGKKKIGIIGASGAGKSTLIDILGGFLEPDGGMIEVNGTSRSHL    394
                     .|.||||||:||||||.||||||||||:||||||...|:|:|.|..|:||
BL00925___cyd    351 GISLSFKGKRKIGIIGESGAGKSTLIDVLGGFLETKSGVIKVGGKKRTHL    400

BSNT_05930___    395 QDGSWQKNLLYIPQHPYIFDDTLGNNIRFYHPSASAEDTARAAAAAGLAE    444
                     |..|||..|||||||||||.|||..|||||||:||.||..:||.||||:|
BL00925___cyd    401 QTDSWQNQLLYIPQHPYIFPDTLAANIRFYHPAASDEDVEQAARAAGLSE    450

BSNT_05930___    445 LVDSLPEGLEGRIGEGGRALSGGQAQRVALARAFLGNRPILLLDEPTAHL    494
                     |:|.||.||:.||||||||||||||||.|:||||||||||:|||||||||
BL00925___cyd    451 LIDQLPNGLKERIGEGGRALSGGQAQRTAVARAFLGNRPIILLDEPTAHL    500

BSNT_05930___    495 DIETEYEIKETMLDLFEDKLVFLATHRLHWMLDMDEIIVLDGGRVAEVGT    544
                     |||||||:|:|||.||||||||||||||||||||||||||..|:|||.||
BL00925___cyd    501 DIETEYELKKTMLKLFEDKLVFLATHRLHWMLDMDEIIVLKDGQVAETGT    550

BSNT_05930___    545 HNELLEKNGVYTKLVKAQLGERA-    567
                     |.||:||.|||.:|||||....| 
BL00925___cyd    551 HQELIEKRGVYYELVKAQSFGGAS    574


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_05930 and BL00925

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
