Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05932 and BL00923
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:01
# Commandline: needle
# -asequence pep-align/BSNT_05932___cydA.1.5803.seq
# -bsequence pep-align/BL00923___cydA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05932___cydA-BL00923___cydA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05932___cydA-BL00923___cydA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05932___cydA
# 2: BL00923___cydA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 469
# Identity: 361/469 (77.0%)
# Similarity: 417/469 (88.9%)
# Gaps: 2/469 ( 0.4%)
# Score: 1952.0
#
#
#=======================================
BSNT_05932___ 1 MSELVLARIQFASTTLFHFLFVPMSIGLVFMVALMETLYLVKKNELYLKM 50
|.||:|||.||||||:|||:|||||||||||||||||||:.||.::|..|
BL00923___cyd 1 MDELILARFQFASTTIFHFIFVPMSIGLVFMVALMETLYVAKKKDIYRTM 50
BSNT_05932___ 51 AKFWGHLFLINFAVGVVTGILQEFQFGLNWSDYSRFVGDVFGAPLAIEAL 100
|||||||||||||||||||||||||||:|||:||||||||||||||:|||
BL00923___cyd 51 AKFWGHLFLINFAVGVVTGILQEFQFGMNWSEYSRFVGDVFGAPLAVEAL 100
BSNT_05932___ 101 LAFFMESIFIGLWIFGWDRLPKKIHALCIWLVSFGTIMSSFWILTANSFM 150
|||||||.|||||||||||||||||.|.|||||.|||||:||||.|||||
BL00923___cyd 101 LAFFMESTFIGLWIFGWDRLPKKIHLLSIWLVSLGTIMSAFWILAANSFM 150
BSNT_05932___ 151 QEPVGFTIKNGRAEMNDFGALITNPQLWVEFPHVIFGALATGAFFIAGVS 200
||||||.||||||||.||.|:|.|||||||||||||||||||||||||||
BL00923___cyd 151 QEPVGFAIKNGRAEMTDFFAIIKNPQLWVEFPHVIFGALATGAFFIAGVS 200
BSNT_05932___ 201 AFKLLKKKEVPFFKQSFKLAMIVGLCAGLGVGLSGHMQAEHLMESQPMKM 250
|:|:|||:|:.|||:||::||||.|.:|.||..|||.||:|||:||||||
BL00923___cyd 201 AYKMLKKQELLFFKKSFQIAMIVALVSGGGVAFSGHEQAQHLMKSQPMKM 250
BSNT_05932___ 251 AASEGLWEDSGDPAAWTAFATIDTKNEKSSNEIKVPYALSYLAYQKFSGS 300
||||.||:|||||||||..|.|||..:::.:|:.:|||||||||::|||.
BL00923___cyd 251 AASEALWDDSGDPAAWTVLANIDTDKQENKSELSIPYALSYLAYKQFSGD 300
BSNT_05932___ 301 VKGMKTLQAEYEKIYGKGDYIPPVKTTFWSFRIMVGAGVVMILAALGGLW 350
|.||||||.:||:.||:|:|||||||||||||||.|:|::||:|||.||:
BL00923___cyd 301 VPGMKTLQKQYEEKYGEGNYIPPVKTTFWSFRIMAGSGLLMIVAALTGLY 350
BSNT_05932___ 351 LNRRKKLENSKWYLRIMIALISFPFLANSAGWIMTEIGRQPWTVMGLMTT 400
|:.||:||.|||:||.|:|||:|||:||:|||||||||||||||.|::||
BL00923___cyd 351 LSFRKRLETSKWFLRTMVALIAFPFIANTAGWIMTEIGRQPWTVFGILTT 400
BSNT_05932___ 401 AQSVSPNVTAGSLLFSIIAFGVMYMILGALLVFLFIREIKKGAEHSD-HH 449
||||||||:||.||||:|||..:|::|..:||:||:|||||||.|.| ||
BL00923___cyd 401 AQSVSPNVSAGMLLFSVIAFTAIYLVLALVLVYLFVREIKKGAAHHDHHH 450
BSNT_05932___ 450 DVPVSTDPFSQEVYHGISS 468
|..||||||.||||||||
BL00923___cyd 451 DDSVSTDPFDQEVYHGIS- 468
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