Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03300 and BL00919

See DNA alignment / Visit BSNT_03300 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:59
# Commandline: needle
#    -asequence pep-align/BSNT_03300___yptA.1.5803.seq
#    -bsequence pep-align/BL00919___yptA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03300___yptA-BL00919___yptA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03300___yptA-BL00919___yptA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03300___yptA
# 2: BL00919___yptA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 63
# Identity:      26/63 (41.3%)
# Similarity:    46/63 (73.0%)
# Gaps:           5/63 ( 7.9%)
# Score: 137.5
# 
#
#=======================================

BSNT_03300___      1 MLNSEHFNLIQRALDATANELKELGTDSSPSVISHAQTDLEKAVEHIYST     50
                     ||||:|..:||:||:.:.::|:::|.:.    :::|:.:|:.|:.|:.||
BL00919___ypt      1 MLNSDHIQMIQKALETSESQLEDIGEER----LTYAKEELKNAISHMEST     46

BSNT_03300___     51 DHPFLSSHVINRK     63
                     ||||| :|.|.||
BL00919___ypt     47 DHPFL-THSIYRK     58


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