Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03300 and BL00919
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:59
# Commandline: needle
# -asequence dna-align/BSNT_03300___yptA.1.5803.seq
# -bsequence dna-align/BL00919___yptA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03300___yptA-BL00919___yptA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03300___yptA-BL00919___yptA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03300___yptA
# 2: BL00919___yptA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 204
# Identity: 119/204 (58.3%)
# Similarity: 119/204 (58.3%)
# Gaps: 39/204 (19.1%)
# Score: 315.5
#
#
#=======================================
BSNT_03300___ 1 ATGCTGAACAGCGAACATTTTAATCTTATTCAAAGGGCGCTTGACGCAAC 50
|||.||||||||||.|||.||.|..|.|||||||..|||||.||..|..|
BL00919___ypt 1 ATGTTGAACAGCGATCATATTCAAATGATTCAAAAAGCGCTGGAGACGTC 50
BSNT_03300___ 51 AGCAAACGAGCTGAAGGAGCTCGG--------GACTGATTCGTCTCCGTC 92
||.||.|.||||..||||..|.|| |.||.|
BL00919___ypt 51 AGAAAGCCAGCTCGAGGACATTGGCGAAGAGCGCCTTA------------ 88
BSNT_03300___ 93 TGTGATTTCGCATGCGCAAA--CTGATTTAGAAAAA-GCGGT-AGAACAT 138
|||..||||| ..||.|| |||||| |||.| || .|||
BL00919___ypt 89 ----------CATATGCAAAGGAAGAATT-GAAAAACGCGATCAG-CCAT 126
BSNT_03300___ 139 ATTTATTCAACAGACCATCCTTTTTTATCGTCGCATGTGATCAATCGTAA 188
||..|.||.|||||.|||||.||||| |.|||||..|||..|.||.||
BL00919___ypt 127 ATGGAATCGACAGATCATCCGTTTTT---GACGCATTCGATTTACCGGAA 173
BSNT_03300___ 189 GTAA 192
.||.
BL00919___ypt 174 ATAG 177
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