Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00354 and BL00917

See DNA alignment / Visit BSNT_00354 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:01
# Commandline: needle
#    -asequence pep-align/BSNT_00354.1.5803.seq
#    -bsequence pep-align/BL00917.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00354-BL00917.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00354-BL00917.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00354
# 2: BL00917
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 884
# Identity:     539/884 (61.0%)
# Similarity:   672/884 (76.0%)
# Gaps:          24/884 ( 2.7%)
# Score: 2862.0
# 
#
#=======================================

BSNT_00354         1 MGITSVLTKDNVKKIDTDIDVQERDLNV--FITSASRVIAPLWPISTFAA     48
                     |.....|:|..:.:.:.    |..|.|:  .:.||:|||||||||.||||
BL00917            1 MKAAPTLSKQLIFQYEH----QTADFNMDELVQSAARVIAPLWPIETFAA     46

BSNT_00354        49 RNPWMGLENQPFDQVASWLKNTRDVDIYPSASMIRSAKNKGEIDEDFVEM     98
                     |:||||||.|.|:|.|..||....|||||.:|:.||||.:|||||..:|.
BL00917           47 RHPWMGLEEQTFEQTARQLKQQLHVDIYPKSSIFRSAKQRGEIDETILEK     96

BSNT_00354        99 GLQRWLDSHSYHIPRDVAERFCHAALKLDPLPSDLLSSHELEKLVGECS-    147
                     .|..|||||...:.|:.||.||.||||||.:|..||.|.:::||..:.: 
BL00917           97 KLINWLDSHQPGMQRETAEAFCKAALKLDEIPGQLLRSRQVKKLAKQAAR    146

BSNT_00354       148 -GLDHIENVFMQPLSSYIENQDGERLVNILDHHVIKWSKLYLDDSQAGWT    196
                      .:|..:..|::|||.:.    |::..::||||||||.||:||:||:.|.
BL00917          147 GTIDGRKTSFIKPLSVFA----GQKSAHLLDHHVIKWCKLFLDESQSAWR    192

BSNT_00354       197 MPNREEGFYRAWQHLIQYDPALSKKQRERVKDWPKEAHLALQEALFALEI    246
                     :|:||:|||.||:.|:::|||||:.:|:|:..||:|...|:::||.|.:|
BL00917          193 LPHREKGFYSAWRQLVEHDPALSRAERQRLNGWPEEPRDAMKKALRAFDI    242

BSNT_00354       247 PESEIQTYLEGHLLSLPGWAGMMLWRSQQSSHEHALLTEYLAVRISMEWA    296
                     ..:::|.|||.|||||||||||||||||||..|..||.||||||:||||.
BL00917          243 SNADVQAYLEAHLLSLPGWAGMMLWRSQQSQDEEELLLEYLAVRLSMEWM    292

BSNT_00354       297 LIKPYLPLTNERSKKKISIAPLIAAWIHWGGLTLEEWSQMTAIEQNEYLS    346
                     |::|||||.....:|::.:.||||:|:||||||.|||.:::|.||...|:
BL00917          293 LVEPYLPLPKPNPEKEMQLVPLIASWLHWGGLTPEEWLELSAAEQKARLT    342

BSNT_00354       347 FAYSFDEKLRKKLWLEAWEQTYTDRLSQKIISKQRETGGKKS--ALAQIA    394
                     .|..||:..|::||||||||||...: :|:|:..:.....||  .|||.|
BL00917          343 LARRFDDITRRRLWLEAWEQTYAAEV-RKLITANKPAAADKSETVLAQFA    391

BSNT_00354       395 FCIDVRSEPFRRQLEKEGPFETIGIAGFFGVPIATCELGSKHSHASLPII    444
                     ||||||||||||.|||.|||||.|.||||.:.|.|||||:||||:|||:|
BL00917          392 FCIDVRSEPFRRALEKSGPFETYGTAGFFNMAIETCELGTKHSHSSLPVI    441

BSNT_00354       445 QKPQNKIKEFADEDVFKKYNQRKQAIHSLSHTFKTMKQNALSSLLLPELS    494
                     .|||::::|.|:|..||.|.:.|:|..|||..|||||||.|:.:||||:|
BL00917          442 LKPQHRVEETAEELPFKSYQEHKKAAASLSSAFKTMKQNLLAGMLLPEVS    491

BSNT_00354       495 GPWLTLQMAARSFVPRKAGRFIRNLREAWLRKPDTKLSLHH-DATEAEIP    543
                     ||||:|||||||.|||.||:..||.|:.||:||.|||||.. :.:||.||
BL00917          492 GPWLSLQMAARSLVPRAAGQAFRNARKTWLKKPQTKLSLDRTETSEAGIP    541

BSNT_00354       544 VGFTDEEKVNYARQALKMMGLTENIAPLVVICGHGSQSTNNPYSAALDCG    593
                     ||||:|||..||||||||||:|:..|||||||||||:||||||::|||||
BL00917          542 VGFTEEEKAAYARQALKMMGITDRFAPLVVICGHGSRSTNNPYASALDCG    591

BSNT_00354       594 ACGGAAGGFNARVLAALCNLSEVREALLTEGIKIPEDTVFAAAEHNTTVD    643
                     |||||:|.||||||||||||..|||.|.::||.||:|||||||||.||:|
BL00917          592 ACGGASGAFNARVLAALCNLPSVRERLRSDGIFIPDDTVFAAAEHITTLD    641

BSNT_00354       644 ELHWLYVPELSEAAQEAFEQIEAVMPKVRHHVNAERLAQLPNFQSKLKNP    693
                     ||||||||||...||:||::|.:|:|.|...|.||||.:||  |...:||
BL00917          642 ELHWLYVPELPAKAQQAFDRINSVLPDVSRTVGAERLEELP--QLGYQNP    689

BSNT_00354       694 KAEANRFAEDWSEIRPEWGLARNAAFIIGKRELTQDCDLEGRAFLHNYDW    743
                     :.|..|||||||||||||||||||:||||.|.||:..|||||||||:|||
BL00917          690 RNEVERFAEDWSEIRPEWGLARNASFIIGTRRLTRGADLEGRAFLHSYDW    739

BSNT_00354       744 KQDESGELLANIIAGPGTVAQWINLQYYASTVAPHYYGSGNKATQTVTSG    793
                     :.||.|.:|:.||:||||||||||||||||||||||||||||||||||:|
BL00917          740 RNDEDGSILSGIISGPGTVAQWINLQYYASTVAPHYYGSGNKATQTVTAG    789

BSNT_00354       794 LGVMQGNASDLLAGLPWQSVMESDHEAYHSPLRLLILIQAPREYVERLLN    843
                     |||||||||||||||||||||.||.|.||:||||||:|:||.:.:||||:
BL00917          790 LGVMQGNASDLLAGLPWQSVMRSDDEIYHAPLRLLIVIEAPDDDIERLLD    839

BSNT_00354       844 HDSAFLQKVQNGWVRLANIDPEGCWESW------    871
                     .|.:|.||.:|||:.||:|:|||.|::|      
BL00917          840 RDHSFRQKAENGWIHLASINPEGKWKNWTNTINE    873


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_00354 and BL00917

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
