Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00474 and BL00908
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:07
# Commandline: needle
# -asequence pep-align/BSNT_00474___lmrB.1.5803.seq
# -bsequence pep-align/BL00908___lmrB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00474___lmrB-BL00908___lmrB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00474___lmrB-BL00908___lmrB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00474___lmrB
# 2: BL00908___lmrB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 481
# Identity: 228/481 (47.4%)
# Similarity: 334/481 (69.4%)
# Gaps: 11/481 ( 2.3%)
# Score: 1208.5
#
#
#=======================================
BSNT_00474___ 1 METTAKASQQYKVMPIMISLLLAGFIGMFSETALNIALTDLMKELNITAA 50
||....:. .|:::.::..|..:.:||.||||||:||:..::.|.
BL00908___lmr 1 MEKNLNSK------AILVTFMIGAFFAILNETLLNIALTELMEVFHVDAP 44
BSNT_00474___ 51 TVQWLTTGYLLVLGILVPVSGLLLQWFTTRQLFTVSLIFSILGTFIAALA 100
|||||.||::||:|:|:|:|.||:|||||||:|...:...:.||.|||.|
BL00908___lmr 45 TVQWLATGFMLVMGVLMPISALLIQWFTTRQMFIGVMSIFLAGTVIAACA 94
BSNT_00474___ 101 PSFSFLLAARIVQALGTGLLLPLMFNTILVIFPPHKRGAAMGTIGLVIMF 150
.:|..||..|::||:|||||:|::.|.:|:|:.|..||..|||.||||||
BL00908___lmr 95 VNFPMLLTGRMIQAVGTGLLIPIIMNALLLIYRPEVRGKIMGTFGLVIMF 144
BSNT_00474___ 151 APAIGPTFSGLVLEHLNWHWIFWISLPFLVLALVFGIAYMQNVSETTKPK 200
||||||||||::::.|.|.|:|.|.:||.|.:::|.:.|:|||.|.|:|:
BL00908___lmr 145 APAIGPTFSGVIVDILGWRWLFIIVIPFAVFSILFAVKYLQNVGEPTRPR 194
BSNT_00474___ 201 IDVLSIILSTIGFGGIVFGFSNAGEGSGGWSSPTVIVSLIVGVVGLILFS 250
.|.|||||||||.||||:|||:|||...|:.||.:|..:|:.::.::||.
BL00908___lmr 195 ADFLSIILSTIGIGGIVYGFSSAGEAQEGFQSPLIIGVIIISLISIVLFV 244
BSNT_00474___ 251 IRQLTMKQPMMNLRAFKYPMFILGVIMVFICMMVILSSMLLLPMYLQGGL 300
:|||.::||::::|.|.|..:..||.:..|.:|.:.:|.:::||||||.|
BL00908___lmr 245 LRQLKLEQPLLDVRVFAYKNYTRGVCLFVIVIMAMFASEIVMPMYLQGPL 294
BSNT_00474___ 301 VLTAFASGLVLLPGGILNGFMSPVTGRLFDKYGPKWLVIPGFVIVTVVLW 350
..:|.|:||:||||.:|||.|||..|.||||:||:.|:|||.:::..|::
BL00908___lmr 295 GFSAKAAGLLLLPGALLNGLMSPAMGALFDKFGPRKLIIPGTIVLVGVMF 344
BSNT_00474___ 351 FFSNVTTASTAVLIIILHTCLMIGISMIMMPAQTNGLNQLPREFYPDGTA 400
|||.:..:......||::..||:.||.||||||||.||:||:..||.|||
BL00908___lmr 345 FFSRINPSVPIWAFIIVYIILMLSISAIMMPAQTNALNELPKHLYPHGTA 394
BSNT_00474___ 401 IMNTLQQMAGAIGTAVAVSIMAAGQHDYMSTVKNPADPAVIPQALTAGVQ 450
|.||||.:|||:|.:|.||||:.||..|::. :..|...::.:|:|.||.
BL00908___lmr 395 ISNTLQPVAGALGVSVFVSIMSQGQKSYLAG-QEAASKQIVHEAMTHGVH 443
BSNT_00474___ 451 HAFVFAMIVAIIGLIGAFFMKR-VKVDH--- 477
||:.||:.::.|....|.|:|: |..|.
BL00908___lmr 444 HAYWFALALSCIAFFTALFIKKAVAPDFDKE 474
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