Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_00474 and BL00908

See DNA alignment / Visit BSNT_00474 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:07
# Commandline: needle
#    -asequence pep-align/BSNT_00474___lmrB.1.5803.seq
#    -bsequence pep-align/BL00908___lmrB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00474___lmrB-BL00908___lmrB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00474___lmrB-BL00908___lmrB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00474___lmrB
# 2: BL00908___lmrB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 481
# Identity:     228/481 (47.4%)
# Similarity:   334/481 (69.4%)
# Gaps:          11/481 ( 2.3%)
# Score: 1208.5
# 
#
#=======================================

BSNT_00474___      1 METTAKASQQYKVMPIMISLLLAGFIGMFSETALNIALTDLMKELNITAA     50
                     ||....:.      .|:::.::..|..:.:||.||||||:||:..::.|.
BL00908___lmr      1 MEKNLNSK------AILVTFMIGAFFAILNETLLNIALTELMEVFHVDAP     44

BSNT_00474___     51 TVQWLTTGYLLVLGILVPVSGLLLQWFTTRQLFTVSLIFSILGTFIAALA    100
                     |||||.||::||:|:|:|:|.||:|||||||:|...:...:.||.|||.|
BL00908___lmr     45 TVQWLATGFMLVMGVLMPISALLIQWFTTRQMFIGVMSIFLAGTVIAACA     94

BSNT_00474___    101 PSFSFLLAARIVQALGTGLLLPLMFNTILVIFPPHKRGAAMGTIGLVIMF    150
                     .:|..||..|::||:|||||:|::.|.:|:|:.|..||..|||.||||||
BL00908___lmr     95 VNFPMLLTGRMIQAVGTGLLIPIIMNALLLIYRPEVRGKIMGTFGLVIMF    144

BSNT_00474___    151 APAIGPTFSGLVLEHLNWHWIFWISLPFLVLALVFGIAYMQNVSETTKPK    200
                     ||||||||||::::.|.|.|:|.|.:||.|.:::|.:.|:|||.|.|:|:
BL00908___lmr    145 APAIGPTFSGVIVDILGWRWLFIIVIPFAVFSILFAVKYLQNVGEPTRPR    194

BSNT_00474___    201 IDVLSIILSTIGFGGIVFGFSNAGEGSGGWSSPTVIVSLIVGVVGLILFS    250
                     .|.|||||||||.||||:|||:|||...|:.||.:|..:|:.::.::||.
BL00908___lmr    195 ADFLSIILSTIGIGGIVYGFSSAGEAQEGFQSPLIIGVIIISLISIVLFV    244

BSNT_00474___    251 IRQLTMKQPMMNLRAFKYPMFILGVIMVFICMMVILSSMLLLPMYLQGGL    300
                     :|||.::||::::|.|.|..:..||.:..|.:|.:.:|.:::||||||.|
BL00908___lmr    245 LRQLKLEQPLLDVRVFAYKNYTRGVCLFVIVIMAMFASEIVMPMYLQGPL    294

BSNT_00474___    301 VLTAFASGLVLLPGGILNGFMSPVTGRLFDKYGPKWLVIPGFVIVTVVLW    350
                     ..:|.|:||:||||.:|||.|||..|.||||:||:.|:|||.:::..|::
BL00908___lmr    295 GFSAKAAGLLLLPGALLNGLMSPAMGALFDKFGPRKLIIPGTIVLVGVMF    344

BSNT_00474___    351 FFSNVTTASTAVLIIILHTCLMIGISMIMMPAQTNGLNQLPREFYPDGTA    400
                     |||.:..:......||::..||:.||.||||||||.||:||:..||.|||
BL00908___lmr    345 FFSRINPSVPIWAFIIVYIILMLSISAIMMPAQTNALNELPKHLYPHGTA    394

BSNT_00474___    401 IMNTLQQMAGAIGTAVAVSIMAAGQHDYMSTVKNPADPAVIPQALTAGVQ    450
                     |.||||.:|||:|.:|.||||:.||..|::. :..|...::.:|:|.||.
BL00908___lmr    395 ISNTLQPVAGALGVSVFVSIMSQGQKSYLAG-QEAASKQIVHEAMTHGVH    443

BSNT_00474___    451 HAFVFAMIVAIIGLIGAFFMKR-VKVDH---    477
                     ||:.||:.::.|....|.|:|: |..|.   
BL00908___lmr    444 HAYWFALALSCIAFFTALFIKKAVAPDFDKE    474


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.