Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02939 and BL00896
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:37
# Commandline: needle
# -asequence pep-align/BSNT_02939.1.5803.seq
# -bsequence pep-align/BL00896.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02939-BL00896.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02939-BL00896.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02939
# 2: BL00896
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 522
# Identity: 206/522 (39.5%)
# Similarity: 247/522 (47.3%)
# Gaps: 220/522 (42.1%)
# Score: 1020.0
#
#
#=======================================
BSNT_02939 0 -------------------------------------------------- 0
BL00896 1 MRWWKAKTRRMIQSSNKPDKPKNEVPSVESTGYFTGDFDHDLKLAKTAME 50
BSNT_02939 0 -------------------------------------------------- 0
BL00896 51 NNSDVHFREFNLGRTGIRAAIVFVEMLADQDLIDKHIMKSLMDDFSKEYK 100
BSNT_02939 1 --------------------------------------MGSTALLIDGIP 12
.|:..|||||..
BL00896 101 VELSSLSSNVTDLIKKQILSISGVSEVNHVNEVVPEVLSGAAMLLIDGSA 150
BSNT_02939 13 QAFLLGTVKKQNRSIKEPLSEALVRGPRTGFTEELSTNTALLRQQGKNDQ 62
:..||||||:..|:|:||:||:||||.|.||||.:.||||||||.|||..
BL00896 151 EVLLLGTVKRNTRNIEEPVSESLVRGARVGFTETIGTNTALLRQHGKNQN 200
BSNT_02939 63 LTLQRFEVGTRLKKDLIIAYMNDIADPKVVEEVRKRVRGIEIDHLPESGY 112
|::.:|:||.|..|:|::||:.|||:|.:||||:||:..|:||.:.|||:
BL00896 201 LSMVQFQVGKRAVKNLVVAYIKDIAEPGLVEEVKKRIEKIDIDDVLESGF 250
BSNT_02939 113 VEQLIEDNYLSPFPQVQSTERPDRVISELMEGRVAILLDGTPFALIVPVT 162
|||||||||||||||||||||.|||:|.|||||||||||||||.||||||
BL00896 251 VEQLIEDNYLSPFPQVQSTERLDRVMSALMEGRVAILLDGTPFVLIVPVT 300
BSNT_02939 163 FSMMLQSPEDYYERWFPSSLIRLLRFIAAMITLFAPALYISFISFHPGLI 212
|||:|||||||||||.||||||::|..||||:|..|||||||||||||||
BL00896 301 FSMLLQSPEDYYERWLPSSLIRIMRIGAAMISLLGPALYISFISFHPGLI 350
BSNT_02939 213 PTKLAISISGTRQGVPFPSLIEALFMEVAIEILREAGLRLPKPIGPAIGI 262
|::|||||:|||.|||||||||||.||||||||||||||||||||||:||
BL00896 351 PSELAISITGTRVGVPFPSLIEALIMEVAIEILREAGLRLPKPIGPAMGI 400
BSNT_02939 263 VGGLIIGKQLCRRGL---------SVQSWSLLLRSQQFLHLPSRIIAQV- 302
|||:|||:...:.|: :|.:.|.....|....:..|::..|
BL00896 401 VGGIIIGEAAVQAGIVSPIMVIVVAVTAISSFAIPQYSAGISLRMLRFVA 450
BSNT_02939 302 -------------------------------------------------- 302
BL00896 451 MFCAATFGLYGVIMFFLMLASHAVKLKSFGVPYASPAVPYRLRDWKDFIV 500
BSNT_02939 302 ---------------------- 302
BL00896 501 RMPIQMMKKRPKLLKTDDSTRQ 522
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