Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03022 and BL00893

See DNA alignment / Visit BSNT_03022 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:43
# Commandline: needle
#    -asequence pep-align/BSNT_03022___ynzE.1.5803.seq
#    -bsequence pep-align/BL00893___ynzE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03022___ynzE-BL00893___ynzE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03022___ynzE-BL00893___ynzE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03022___ynzE
# 2: BL00893___ynzE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 136
# Identity:      55/136 (40.4%)
# Similarity:    74/136 (54.4%)
# Gaps:          35/136 (25.7%)
# Score: 291.0
# 
#
#=======================================

BSNT_03022___      1 --------------------------------MLTDPAEEAFLPNFLLLG     18
                                                     :||:|.::.|:..||||.
BL00893___ynz      1 MGKLTEKLGLALVFSIVVWLGATVFFMLFGSAVLTEPGQDGFMLRFLLLE     50

BSNT_03022___     19 ADTALVLCLVFFLYQKLDQSQFAVIKLGIWGSAVGLLIDTISLWNHPLIL     68
                     |.|..:|..|..:|:::|:::||.:||||.||||||.:|..|||||.||.
BL00893___ynz     51 AGTFALLYAVMLVYRRVDKTRFAAVKLGIVGSAVGLFLDAFSLWNHSLIF    100

BSNT_03022___     69 PALSKGQVIAFAIWMVCAYCMYLLIPLKLSHKK---    101
                     ||||.||:|.||:|||.||.|||.|||.|..::   
BL00893___ynz    101 PALSDGQMIGFAVWMVFAYAMYLTIPLILEKRRSAV    136


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