Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02162 and BL00866

See DNA alignment / Visit BSNT_02162 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:39
# Commandline: needle
#    -asequence pep-align/BSNT_02162___xkdX.1.5803.seq
#    -bsequence pep-align/BL00866___yomP.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02162___xkdX-BL00866___yomP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02162___xkdX-BL00866___yomP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02162___xkdX
# 2: BL00866___yomP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 58
# Identity:      28/58 (48.3%)
# Similarity:    40/58 (69.0%)
# Gaps:           4/58 ( 6.9%)
# Score: 161.0
# 
#
#=======================================

BSNT_02162___      1 --MNYWVLALYYEWATADMVKQALAYKDCSIEDLAEGVNKKLITADQYKE     48
                       :|:||.||||.||...||||||.|.|.:||:|.:||::..:|.:|::|
BL00866___yom      1 MDLNFWVYALYYNWADTPMVKQALQYNDVTIEELRDGVDQGYVTPEQFQE     50

BSNT_02162___     49 ITGKAM--     54
                     |||:..  
BL00866___yom     51 ITGEKYIA     58


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.