Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02162 and BL00866
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:39
# Commandline: needle
# -asequence dna-align/BSNT_02162___xkdX.1.5803.seq
# -bsequence dna-align/BL00866___yomP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02162___xkdX-BL00866___yomP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02162___xkdX-BL00866___yomP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02162___xkdX
# 2: BL00866___yomP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 183
# Identity: 117/183 (63.9%)
# Similarity: 117/183 (63.9%)
# Gaps: 24/183 (13.1%)
# Score: 310.0
#
#
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BSNT_02162___ 1 ATG------AATTATTGGGTGCTTGCCCTCTATTATGAGTGGGC-GACAG 43
||| ||||.|||||||...||.||.||||||.|.||||| ||.|
BL00866___yom 1 ATGGATCTTAATTTTTGGGTGTACGCTCTTTATTATAATTGGGCTGATA- 49
BSNT_02162___ 44 CAGATATGGTAAAACAAGCATTAGCATATAAAGACTGT-TCAATTGAGGA 92
|...||||||.||.||||||.||..|||.||.||| || .||||||||||
BL00866___yom 50 CTCCTATGGTTAAGCAAGCACTACAATACAATGAC-GTAACAATTGAGGA 98
BSNT_02162___ 93 TCTGGCAGAGGGTGT-GAACAAAAAGCTGATCACAGCTGACCAGTATAAA 141
..|...|||.||||| ||.|||..|..|| |.||..||||.||.|...||
BL00866___yom 99 GTTAAGAGACGGTGTAGATCAAGGATATG-TTACGCCTGAGCAATTCCAA 147
BSNT_02162___ 142 GAAATTACCG-------GTAAA--GCCATGTAG 165
|||||.||.| |||.| ||| |||
BL00866___yom 148 GAAATAACTGGCGAGAAGTACATTGCC---TAG 177
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