Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00130 and BL00859
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:48
# Commandline: needle
# -asequence pep-align/BSNT_00130___pabA.1.5803.seq
# -bsequence pep-align/BL00859___pabA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00130___pabA-BL00859___pabA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00130___pabA-BL00859___pabA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00130___pabA
# 2: BL00859___pabA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 194
# Identity: 164/194 (84.5%)
# Similarity: 184/194 (94.8%)
# Gaps: 0/194 ( 0.0%)
# Score: 886.0
#
#
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BSNT_00130___ 1 MILMIDNYDSFTYNLVQYLGELGEELVVKRNDSITIEEIEELSPDFLMIS 50
||||||||||||||||||||||||||||||||.||::|||::||||||||
BL00859___pab 1 MILMIDNYDSFTYNLVQYLGELGEELVVKRNDEITLQEIEDMSPDFLMIS 50
BSNT_00130___ 51 PGPCSPDEAGISLEAIKHFAGEIPIFGVCLGHQSIAQVFGGDVVRAERLM 100
||||||||||||||||:||||:||||||||||||||||||||||||||||
BL00859___pab 51 PGPCSPDEAGISLEAIRHFAGKIPIFGVCLGHQSIAQVFGGDVVRAERLM 100
BSNT_00130___ 101 HGKTSDIEHDGKTIFEGLKNPLVATRYHSLIVKPETLPSCFTVTAQTKEG 150
|||||:|.|||.|:|:||::||.|||||||||||:|||.||..:|.|:||
BL00859___pab 101 HGKTSEISHDGLTVFKGLEHPLTATRYHSLIVKPDTLPDCFETSAWTEEG 150
BSNT_00130___ 151 EIMAIRHNDLPIEGVQFHPESIMTSFGKEMLRNFIETYRKEVIA 194
|||||||.:||:||||||||||||::|||||:||||||||:|.|
BL00859___pab 151 EIMAIRHKELPVEGVQFHPESIMTAYGKEMLKNFIETYRKKVNA 194
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