Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00130 and BL00859

See Amino acid alignment / Visit BSNT_00130 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:48
# Commandline: needle
#    -asequence dna-align/BSNT_00130___pabA.1.5803.seq
#    -bsequence dna-align/BL00859___pabA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00130___pabA-BL00859___pabA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00130___pabA-BL00859___pabA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00130___pabA
# 2: BL00859___pabA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 589
# Identity:     435/589 (73.9%)
# Similarity:   435/589 (73.9%)
# Gaps:           8/589 ( 1.4%)
# Score: 1549.0
# 
#
#=======================================

BSNT_00130___      1 ATGATTTTAATGATTGATAACTACGATTCATTCACGTACAACTTGGTACA     50
                     ||||||.|||||||.||.||.||||||||.||.||||||||||||||.||
BL00859___pab      1 ATGATTCTAATGATCGACAATTACGATTCGTTTACGTACAACTTGGTTCA     50

BSNT_00130___     51 GTATTTGGGCGAGCTTGGGGAAGAGCTGGTTGTGAAACGCAATGA-CAGC     99
                     ||||||.|||||||||||.||.|||.||||.||.||.||.||.|| .|| 
BL00859___pab     51 GTATTTAGGCGAGCTTGGCGAGGAGTTGGTCGTCAAGCGGAACGATGAG-     99

BSNT_00130___    100 ATCACAATCGAAGAAATTGAAGAACTGTCTCCGGACTTTCTGATGATATC    149
                     |||||..|..|.|||||.||.||..||||.||.||||||.|||||||.||
BL00859___pab    100 ATCACCCTTCAGGAAATAGAGGACATGTCGCCTGACTTTTTGATGATTTC    149

BSNT_00130___    150 TCCCGGACCGTGCAGCCCTGATGAGGCGGGAATCAGCCTCGAAGCAATTA    199
                     ||||||.||.|||||.||.||||||||.||.||||||||.|||||.||..
BL00859___pab    150 TCCCGGGCCTTGCAGTCCGGATGAGGCCGGGATCAGCCTTGAAGCGATCC    199

BSNT_00130___    200 AACATTTCGCAGGGGAAATTCCTATTTTCGGTGTATGTCTCGGACATCAG    249
                     ..|||||.||.|||.|.||.||.||||||||.||.||.||||||||.|||
BL00859___pab    200 GCCATTTTGCCGGGAAGATACCGATTTTCGGGGTTTGCCTCGGACACCAG    249

BSNT_00130___    250 TCCATCGCACAAGTGTTCGGTGGTGACGTTGTTAGGGCAGAACGGCTTAT    299
                     ||.|||||.||.||.|||||.||.||.||.||.||||||||.|||||.||
BL00859___pab    250 TCGATCGCCCAGGTTTTCGGCGGCGATGTCGTCAGGGCAGAGCGGCTAAT    299

BSNT_00130___    300 GCACGGGAAAACCTCGGATATCGAGCATGACGGCAAAACCATTTTTGAAG    349
                     |||.||||||||.||.||.||...|||.|||||....||..|||||.|||
BL00859___pab    300 GCATGGGAAAACTTCCGAGATTTCGCACGACGGGCTGACGGTTTTTAAAG    349

BSNT_00130___    350 GGTTGAAAAACCCCCTTGTTGCGACGCGATACCACTCGCTGATCGTAAAA    399
                     |..||.||.|.||.||....||.|||.|.||.||.||..|||||||.|||
BL00859___pab    350 GCCTGGAACATCCGCTCACGGCCACGAGGTATCATTCTTTGATCGTCAAA    399

BSNT_00130___    400 CCTGAGACGCTGCCAAGCTGTTTT---ACAGTAACAGCACAAACGAAAGA    446
                     ||.||.||.|||||....||||||   ||   |.|.||....|||.||||
BL00859___pab    400 CCGGATACACTGCCCGATTGTTTTGAGAC---ATCGGCTTGGACGGAAGA    446

BSNT_00130___    447 AGGAGAAATCATGGCTATTCGCCACAATGACCTCCCGATAGAGGGCGTGC    496
                     |||.||.||.|||||.||..|.||.||.||.||.|||.|.||.|||||.|
BL00859___pab    447 AGGGGAGATTATGGCCATCAGGCATAAAGAACTGCCGGTTGAAGGCGTTC    496

BSNT_00130___    497 AATTTCACCCAGAGTCTATTATGACCTCCTTTGGGAAAGAAATGCTCAGA    546
                     |.||.||.||||||||.|||||||||.|.|..||.|||||.|||||.|..
BL00859___pab    497 AGTTCCATCCAGAGTCGATTATGACCGCTTACGGAAAAGAGATGCTGAAG    546

BSNT_00130___    547 AATTTTATTGAGACATATCGCAAGGAAGTTATTGCGTGA    585
                     ||||||||||||||.||.||.|||.||||.|..||.|||
BL00859___pab    547 AATTTTATTGAGACTTACCGAAAGAAAGTGAACGCATGA    585


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